Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0976 ATGGCTCTTCCCGGTTCTCTGCAGCTGTCCCATGATTTGGGACATTGCAGGAACCTGGGCTGCAATAAACAACATACGAGGGTAATGTGCAGAGGCAGATTACATTTGTTGACTGCAGCACCCTCATATCGTGTCTCGTTTCTAAATGAGGACTGCTGGAGACCTCAACTCCTTTGCAATATAAACAGGCCAACACATACCTTATCTTGCAAATCTCATGCTTTTAAGTGCCGTTCTTTTCTAGTACCAAGCCAACCAAGTGAGTTACCTGTTGTTAAGGTGGCTGCCTCAGCACTGGCAAGGTCCTATAATTTATTACAATGTAGTCCTGTCACATTAAAGTTGATGCCAGCAATTGGTGTAATCATTTTTGCAGTATGGGGTGTTGGCCCATTAATGTATCAGACAAGAAAACTGCTTCTTCAGAGGAGCGACAGTAGTTGGAAGAAAAGCAGCACACATTATGTAGTAACTTCTTACCTTCGGCCTTTACTGTTATGGACTGGAGCTTTACTTATTTGCAGAGCATTAGACCCAGTAATTCTACCCTCAGAACCAGCCCAGGTTGTTAAGGAACGGCTTTTGAATTTTGTACAATCATTGTCAACTGTACTTGCCTTTGCCTATTGTTTATCAAGTGTGATTCAACAAGCACAGAAATTCTTCATGGAGAGCACTGATGCCCGTGGGACAAGAAATATGGGATTCCAATTTGTGGGCAAAGCTGTTTATTCTGCAGTATGGATTGCTGCTTTTTCATTGTTCATGGAACTGCTGGGTTTTTCTACCCAGAAATGGGTTACCGCTGGAGGTCTTGGGACAGTTTTGCTAACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGTGCGATGATTCATGCAACTCGGCCTTTTGTGGTGAATGAATGGATTCAAACAAAGATTGAAGGATATGAAGTTTCTGGTACTGTGGAGCATGTTGGCTGGTGGTCACCAACAGTTATAAGAGGTGAAGATCGTGAAGCTGTTCATATTCCAAACCACAAGTTTACTGTGAATGTTGTGCGAAACCTTAGTCAAAAAACACATTGGCGCATCAAAACTCACCTTGCTATTAGTCATTTGGATGTAAATAAGATAAATAATATTGTTGCCGACATGCGGAAAGTCTTGGCTAAAAATCCTCAAGTTGAGCAGCAGAGGCTGCACAGGAGAGTGTTTCTGGACAATATAAATCCGGAAAATCAGGCTCTTTTGATACTGGTGTCTTGTTTTGTCAAGACCGCACATCATGAAGAATATTTGTGTGTTAAGGAAACTATACTGTTGGATCTTCTTAGGGTTATTAGCCATCACCGGGCCCGACTTGCAACACCTGTTCGTACACTGCAGAAAATTTACAGTGATGCCGACCTGGAGAACATACCATTTGCAGATTCTGTATTTAGTGGTGTTGGAACAGTATCTAGCCGTCCTTTAATTATTGAACCACCTTACAAAATCAATGGAGATGATAAGACAAAAAGTCGACCAGCTTACACATCAGGTGAAAGTGACAAGAAGACAACTGTGCAAACCAAACTTGACACCAAGACAGACTCTAAGGTTAGAGTAACTCCTCCTGATTCTGAGGCAGATGCCAAAGTTGTGACATCTTACTCCGATGCAAATGGAAACTCCAAGACTGCCGTGACATCCACGCCCAATCCTGAAGTGGTTGAAAATGAGCCAATGAAAAAGGATTCAAATATTATCTTAAAGGAAAATCTGGAGGTGCCAGATATGTCTGCTTCCAACTCCAAAGTGACTGGGTCGATATCAGATAATGTAACCCAGAAGAATTTCAATGTCAAACAATCGAAGGGTCAGACTGTTAAAAACAAGCAGAGCACTGGCCCTGACAATCTGATTTCAACCTCATCATCAAGCAATGCTGACAAAGCAGGTGGACATCCTACAAATATGCCGTCAAAACAGCAAGATCAAAGGAAACCTGCTGCATCCAGGCCTGTCCTTGAAGAAAATATAGTACTTGGCGTAGCATTGGAGGGATCAAAGAGAACCCTTCCTATTGAGGAGGCGATGGACTCAGCTGCTTCTCGAGAGGCAAAAGAAATGGCTTCATGCCAGGGTGGAAATAGATCTCCAACGGCTGAGGATGGGAAAAATAAGTAA 2160 0.4259 MALPGSLQLSHDLGHCRNLGCNKQHTRVMCRGRLHLLTAAPSYRVSFLNEDCWRPQLLCNINRPTHTLSCKSHAFKCRSFLVPSQPSELPVVKVAASALARSYNLLQCSPVTLKLMPAIGVIIFAVWGVGPLMYQTRKLLLQRSDSSWKKSSTHYVVTSYLRPLLLWTGALLICRALDPVILPSEPAQVVKERLLNFVQSLSTVLAFAYCLSSVIQQAQKFFMESTDARGTRNMGFQFVGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTVIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTAHHEEYLCVKETILLDLLRVISHHRARLATPVRTLQKIYSDADLENIPFADSVFSGVGTVSSRPLIIEPPYKINGDDKTKSRPAYTSGESDKKTTVQTKLDTKTDSKVRVTPPDSEADAKVVTSYSDANGNSKTAVTSTPNPEVVENEPMKKDSNIILKENLEVPDMSASNSKVTGSISDNVTQKNFNVKQSKGQTVKNKQSTGPDNLISTSSSSNADKAGGHPTNMPSKQQDQRKPAASRPVLEENIVLGVALEGSKRTLPIEEAMDSAASREAKEMASCQGGNRSPTAEDGKNK 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0976 719 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 708 IPR045042 -
Glsi09g0976 719 MobiDBLite consensus disorder prediction 608 719 - -
Glsi09g0976 719 MobiDBLite consensus disorder prediction 496 510 - -
Glsi09g0976 719 MobiDBLite consensus disorder prediction 545 567 - -
Glsi09g0976 719 SUPERFAMILY Sm-like ribonucleoproteins 284 354 IPR010920 -
Glsi09g0976 719 MobiDBLite consensus disorder prediction 608 659 - -
Glsi09g0976 719 MobiDBLite consensus disorder prediction 492 577 - -
Glsi09g0976 719 Gene3D - 300 355 IPR023408 -
Glsi09g0976 719 MobiDBLite consensus disorder prediction 517 537 - -
Glsi09g0976 719 Pfam Mechanosensitive ion channel 241 448 IPR006685 GO:0016020|GO:0055085
Glsi09g0976 719 Gene3D - 196 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0976 Glsi-ChrGlsi09 6840966 6847613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0976 9 719 Mechanosensitive Ion Channel Family AT5G10490 55.509 0.0 739