Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0943 ATGCTCACGAGAAAGAAAGGAGCAATTGTTAATATTGGTTATGGAGCAGCAATTGTGATTCCTTCAGATCCTCTTTATGCTTTATATACGGCCTCAAAAGCGTACATAGATCAATTTTCGAGATGCCTCTATGTTGAATACAAGAAAAATGGTATTGATGTGCAGTGTCAGGCTTCAAGTGCATACCTGGGAAAAGCAGAGGATGCTGTGGATTTTGACATCACCTACTACCGCAGCAAAGACCCATTGACTCCTAGGCTTTTCGAAGACATTCTTGAAGAGATAGAGCAGATTGGGTTGTTCAAATATGGAGGGTTACCCCATTGGGGAAAGAACAGGAACTTGGCCTTTGATGGAGTGACCAAGAAGTATCCTAATGCAGAGAAGTTTTTGAATGTGAAAAAAGTGATAGCCATTGTGCTCCAAGCAAGAACTACTTCTGCAGAGCAGGCAGGGTTTATAAGGAAACAAGGTCTGCGCTGGATAGGCTATGAGCCTCGTTGCACACCTTACTGGTCCCATTCCATTCTGTGGTCGTTGGCACAATCATTGCCAGAGTATATTGTTGATGCGTGGCGCCTGAGGTTTTGCCTTGGCATTCGAAAGAGGGGCAGCTCAAGGACTCTAGGAACAAGGAATAAGGGAAGAAATTTTGTCAAAATTTTTGTAGTATTTAAAAGACAGAAACTAGACATAAGGCCCGAGATCAAAAACAGGGAACATTTCTCATCTAGCTTTGCAATATGGAACTGGAGTTTGTCTTACTCCACCATCCTCCATATATGGTATTTCCTTCTATATATTATACATCCTCGACTCCAGTCTCCTGTCACACATATCCATCTGCATACCCATTTGAAACAAAACATGGCAAAGGTTTTCTCCGCAGAAGAAAAGCATAAAACATCTGCCTATGGGTTTGCTGGTAGAGACTCCTCAGGATTTGTCTCTCCCTTTCACTTCTCCAGAAGGGGCAACGGTGATCATGATATCACCGTGAAGATACTTTATTGTGGGATTTGTCACGCCGACGTTCATTTTCTCAAGAATGAATTGGGCCACAGCATCTACCCCATGGTTCCCGGGCATGAGATTGTGGGGGAAGTGACAAAGGTGGGTCCAAGCGTTACAAAATTCAGAATTGGGGATATAGCTGGTGTGGGTCCACTTTTGAGTTCCTGTCGCTCCTGTCCTAACTGCAACGAAGGCTGGGAAAATTATTGCCCCAAGAAGGTTTTAACCTATAATTCTCATGATCATGACGGATCAGTAACCTACGGTGGATACTCTGATAAAACACTGATTGATGAGCATTTTGCGACCAAGATGCCCACAAGCTTGCCACTTGATGGTGCAGCTCCATTACTGTGCGCTGGAATCACGGTGTACAGCCCCATGTTGTACCATGGACTGTGTGAGCCAGGTCAGCATCTGGGTGTGGTAGGCTTAGGTGGACTTGGTCATGTGGCTGTCAAGTTTGCCAAGGCTTTCAACATGAAGGTGACAGTGATAAGTACTTCTCCGGGGAAGAAGAAGGAAGCATTGGAAAGGCTTGGCGCTGACGCTTTCTTGCTCAGTAATGACCAACAACAATTGCAGGATGCCAAGGACACGATGGATGGCGTCATTGACACAGTATCAGGCCCTCACTCTCTCCACCCGTTGATTGATTTATTGAAGACAGCAGGGAAATTGATTTTGGTGGGCGCATCAATCATACCTCCTGAGTTACCAACTTTGCCTTTGATGATGGAGAGGAAGATGATTGCTGGAAGTGCTGCTGGAGGGGTAAAAGAGAGCCAACAGATGATCGATTTTGCTGCAAAGCACAATATCACGGCAGATATTGAGGTTATTCCAATGGATTATGTGAACACTGACTTGGAGCGAGTTGCGAAAAATGATGTTAAATACAGATTTGTCATCGATGTGGCCAACACGCTTAAGGTCTCTCCTCCTGTTAGTTAG 1968 0.4477 MLTRKKGAIVNIGYGAAIVIPSDPLYALYTASKAYIDQFSRCLYVEYKKNGIDVQCQASSAYLGKAEDAVDFDITYYRSKDPLTPRLFEDILEEIEQIGLFKYGGLPHWGKNRNLAFDGVTKKYPNAEKFLNVKKVIAIVLQARTTSAEQAGFIRKQGLRWIGYEPRCTPYWSHSILWSLAQSLPEYIVDAWRLRFCLGIRKRGSSRTLGTRNKGRNFVKIFVVFKRQKLDIRPEIKNREHFSSSFAIWNWSLSYSTILHIWYFLLYIIHPRLQSPVTHIHLHTHLKQNMAKVFSAEEKHKTSAYGFAGRDSSGFVSPFHFSRRGNGDHDITVKILYCGICHADVHFLKNELGHSIYPMVPGHEIVGEVTKVGPSVTKFRIGDIAGVGPLLSSCRSCPNCNEGWENYCPKKVLTYNSHDHDGSVTYGGYSDKTLIDEHFATKMPTSLPLDGAAPLLCAGITVYSPMLYHGLCEPGQHLGVVGLGGLGHVAVKFAKAFNMKVTVISTSPGKKKEALERLGADAFLLSNDQQQLQDAKDTMDGVIDTVSGPHSLHPLIDLLKTAGKLILVGASIIPPELPTLPLMMERKMIAGSAAGGVKESQQMIDFAAKHNITADIEVIPMDYVNTDLERVAKNDVKYRFVIDVANTLKVSPPVS 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0943 655 Pfam Zinc-binding dehydrogenase 485 608 IPR013149 -
Glsi09g0943 655 PANTHER ALDEHYDE REDUCTASE 297 647 IPR047109 GO:0016616
Glsi09g0943 655 Gene3D - 1 70 - -
Glsi09g0943 655 SUPERFAMILY GroES-like 316 476 IPR011032 -
Glsi09g0943 655 FunFam Putative cinnamyl alcohol dehydrogenase 6 615 644 - -
Glsi09g0943 655 Pfam Alcohol dehydrogenase GroES-like domain 329 442 IPR013154 -
Glsi09g0943 655 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 83 IPR036291 -
Glsi09g0943 655 Pfam short chain dehydrogenase 1 57 IPR002347 -
Glsi09g0943 655 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 447 612 IPR036291 -
Glsi09g0943 655 Gene3D - 308 644 - -
Glsi09g0943 655 FunFam Cinnamyl alcohol dehydrogenase 458 614 - -
Glsi09g0943 655 Gene3D - 458 614 - -
Glsi09g0943 655 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 362 376 IPR002328 GO:0008270|GO:0016491
Glsi09g0943 655 CDD CAD1 306 643 IPR047109 GO:0016616
Glsi09g0943 655 SMART PKS_ER_names_mod 309 642 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0943 Glsi-ChrGlsi09 6551898 6573366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0943 290 652 Monolignol Biosynthesis Gene Families AT4G37990 62.259 1.66e-146 427