Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0941 ATGGAACTGGAGTTTGGTACTAGAACAAAATTGCTGCCTCCAAGAAATGGTCCTACCATTTGGGAGATTGGCATCCCTTATCGCCCAGCCTCTGAGTTCTATGTCCCAGACCCATATCCTACCCTCATGAACCGGTTGTACGATGGAAAACCAAAAGACAAGTTTAGGCAATACGGGTTGTGGCAACGCTACTCTGACTTATATCCGACGGATGACCTCGTTTACACTGTTGGTGTGGATGATTATAGACAAAATTGGTTCTATGCTCAGGTTACCAGGAACTTAGGAAATGACAGATACAGTCCAACGACATGGCAGATAGCATTTGAACTCCCATTTGTTATAAGAGGAAATTACACGCCACAACTTGCCTTGGCATCAGCCAGCACTTCTCGGTTGGGGGTTCGGTTCAATGATCCTTTAGCACATCCTCCACACTTCGATACGGGAGTAATAGGGCAGGACAACGCCATAGCAAGGCATGGCATCCATGGATTGTATTGGAGGTACAGCATTGAAGTACCAAGCAACCTACTCGTGAGAGGAAAGAACACCATCTATCTAAGACAGGGAAGAGGACAAACACCTTACCAAGGAATTATGTACGACTATGTCCGTTTAGAGAGGCCTCCAAATTGA 639 0.4585 MELEFGTRTKLLPPRNGPTIWEIGIPYRPASEFYVPDPYPTLMNRLYDGKPKDKFRQYGLWQRYSDLYPTDDLVYTVGVDDYRQNWFYAQVTRNLGNDRYSPTTWQIAFELPFVIRGNYTPQLALASASTSRLGVRFNDPLAHPPHFDTGVIGQDNAIARHGIHGLYWRYSIEVPSNLLVRGKNTIYLRQGRGQTPYQGIMYDYVRLERPPN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0941 212 Pfam Polysaccharide lyase family 4, domain III 19 207 IPR029411 -
Glsi09g0941 212 CDD RGL4_C 21 208 - -
Glsi09g0941 212 SUPERFAMILY Galactose-binding domain-like 16 208 IPR008979 -
Glsi09g0941 212 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 13 211 - -
Glsi09g0941 212 Gene3D - 16 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0941 Glsi-ChrGlsi09 6530917 6533149 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0941 8 210 Polysaccharide Lyase AT4G38030 61.275 4.84e-79 247