Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0931 ATGGCTACCACTTTCTGCTATTCACACGCCCTTCCTCTGTTCTTCAACTCCTTCTTTTTCTTTCCCCTGTTTGCCAATTCACTTCACTTCCAAAAGTCTCGTTTTGGTTCTGAAGATGCCGACATACTCTACCTAGGATCAGCAGCACCTCTTGCTGGAGGTATTAAATTTAACATCAATGACCAATATACATGCCAAGTTGGACGGGCCATCTATGCCAAAAGGGTGTTACTCTGGGACTCAAGAACAGGACGACTCACTGATTTCACCTCTCAATATACCTTCACTATTGACACTCAAGGTCGATCTAATTATGGCCATGGACTTTGCTTCTTCCTTGCTCCTTTTGGTTTTGAAATCCCACCAAATTCCTCTGGTGGTTTTCTAGGCCTATTTAATACCACAACCAGTGGCTCATCCCAGAACCAAATTGTTCTCGTGGAATTCGACTCCTTCCCAAATTCTGAATGGGGTGAGACCACGGAACATGTGGGAATTAACAGCAACTCAATTGCTTCATCCGTATCCACACCTTGGAATGCTAGTCTACACAGTAGCGACACTGCACATGTGTGGATTACGTACAACTCTACAACAAAGAATTTAAGTGTATCTTGGAAATACCAAAAGACCTCAAATCCTCAAGAGAATACTAACCTTTCTTATCAGATTGATTTAATGAAGGTACTGCCTGAATGGGTTACTATTGGATTTTCCGCAGCAACAGGTGCGAATGGAGAAATTCATACCCTTTTGTCTTGGGAGTTCAACTCAACTTTGGATAAAAGTGAAGACAATAAAAAGACAAAACTAGTAGTGATTCTTACTGTTTTAGGCGGTGTTTTAATTGTTGGAGGAGCTGTTGCGGCATATGCATTACTTTGGAGGAAGAAGAAAATGAAAAGCAAAACGAAAGAAGCTGTGAACTTGACATCAATTAACGATGACCTTGAAAGAGGAGCGGGACCAAGAAGGTTCTCTTACAGTGACCTTGCTGTGGCTACCAACAATTTCTCCAAAGACAGAAAACTGGGTCAAGGTGGGTTTGGTGCTGTTTACAGGGGTTACTTTGCTGATCCAGATTTGGCAGTTGCTGTGAAGAAAATATCGAGGGGATCAAGACAAGGGAAAAGAGAGTATTTAACAGAGGTAAAGATCATTAGCCAGCTGAGACACAGGAATCTTGTGCAGCTTATTGGTTGGTGCCATGACAGAGGTGAGTTCCTACTTGTTTACGAGTTCATGCCAAATGGTAGCCTTGATACTCATTTGTTTGGGAAGAAGTCTCCTCTCCTTTGGAACGTGAGACACAAGATAGCTCTTGGATTGGCCTCTGGACTGCTCTATCTTCATGAAGAATGGGAACAATGTGTGGTTCACAGGGATATCAAATCGAGCAATGTGATGCTAGATTCTAGTTTCAATGTCAAACTTGGGGACTTCGGGTTGGCCAAACTCATGGACCATGAGCTAGGTCCCCAAACAACCGGGTTGGCTGGAACTATAGGCTATTTGGCTCCAGAATATATAAGTTCGGGTAGGGCCAGCAAAGAGTCAGACGTATATAGCTTTGGGGTGGTTGCCTTAGAGATTGCCACAGGAAGAAAGGCCGTTGAACTTATGGAGGACAAAGGGGTTGAAAAGGGATTGATTGAGTGGGTATGGGATCATTATGGCAGAGGGGAGCTGATTGTGGCCATGGATGAGAAACTACAAAGGGAGTATGATGGAAAACAAGTGGAGTGTTTGATGATTGTTGGGCTGTGGTGTGCTCACCCTGATAAAAATTTGAGACCATCAATAAGGCAAGCAATTCATGTACTTAATTTTGAGGCTTCCATGCCAGGCCTTCCATCAAAGAAGCCTGTTCCAACCTATTAG 1881 0.4333 MATTFCYSHALPLFFNSFFFFPLFANSLHFQKSRFGSEDADILYLGSAAPLAGGIKFNINDQYTCQVGRAIYAKRVLLWDSRTGRLTDFTSQYTFTIDTQGRSNYGHGLCFFLAPFGFEIPPNSSGGFLGLFNTTTSGSSQNQIVLVEFDSFPNSEWGETTEHVGINSNSIASSVSTPWNASLHSSDTAHVWITYNSTTKNLSVSWKYQKTSNPQENTNLSYQIDLMKVLPEWVTIGFSAATGANGEIHTLLSWEFNSTLDKSEDNKKTKLVVILTVLGGVLIVGGAVAAYALLWRKKKMKSKTKEAVNLTSINDDLERGAGPRRFSYSDLAVATNNFSKDRKLGQGGFGAVYRGYFADPDLAVAVKKISRGSRQGKREYLTEVKIISQLRHRNLVQLIGWCHDRGEFLLVYEFMPNGSLDTHLFGKKSPLLWNVRHKIALGLASGLLYLHEEWEQCVVHRDIKSSNVMLDSSFNVKLGDFGLAKLMDHELGPQTTGLAGTIGYLAPEYISSGRASKESDVYSFGVVALEIATGRKAVELMEDKGVEKGLIEWVWDHYGRGELIVAMDEKLQREYDGKQVECLMIVGLWCAHPDKNLRPSIRQAIHVLNFEASMPGLPSKKPVPTY 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0931 626 FunFam L-type lectin-domain containing receptor kinase IX.1 323 414 - -
Glsi09g0931 626 ProSitePatterns Legume lectins alpha-chain signature. 230 239 IPR000985 -
Glsi09g0931 626 Gene3D Transferase(Phosphotransferase) domain 1 415 626 - -
Glsi09g0931 626 ProSiteProfiles Protein kinase domain profile. 338 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0931 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Glsi09g0931 626 FunFam Lectin-domain containing receptor kinase A4.3 415 626 - -
Glsi09g0931 626 Pfam Legume lectin domain 28 271 IPR001220 GO:0030246
Glsi09g0931 626 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 264 IPR013320 -
Glsi09g0931 626 PANTHER - 60 610 - -
Glsi09g0931 626 ProSitePatterns Protein kinases ATP-binding region signature. 344 368 IPR017441 GO:0005524
Glsi09g0931 626 SUPERFAMILY Protein kinase-like (PK-like) 322 610 IPR011009 -
Glsi09g0931 626 Gene3D Phosphorylase Kinase; domain 1 323 414 - -
Glsi09g0931 626 FunFam L-type lectin-domain containing receptor kinase IX.1 26 269 - -
Glsi09g0931 626 CDD STKc_IRAK 344 609 - -
Glsi09g0931 626 SMART serkin_6 338 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0931 626 CDD lectin_legume_LecRK_Arcelin_ConA 28 260 IPR001220 GO:0030246
Glsi09g0931 626 Pfam Protein kinase domain 338 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0931 626 Gene3D - 25 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0931 Glsi-ChrGlsi09 6467356 6469236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0931 13 626 Receptor kinase-like Gene Family AT5G10530 60.320 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi09g0931 Pkinase 7.1e-49 CL0016