Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0930 ATGGATGCCACTTTCTTCTATTCTCATACCCTTCCTCTTTTCTTCTTGATTCTCTCAGCATATTCAATTCACTTCCAAATATCTCGGTTTGATCCTAATAATGCCAACATACTCTATCGGGGAGATGCTGTAGATCGTGTTGGAGCAATTGAATTCAACAATAAAATCGACTATTTGTTTCAAGTTGGATCAGCCATCTATGCCGAAAACGTGTTAATTTGGGACTCCAGCACAGGAAAAGCCACTGACTTCACAACCCATTTCACCTTCTTTATTGACACTGAAGGCCGATCGCAATATGCCAGTGGACTCGCCTTCTTCCTTGCACCTGCTGGATTTCAAATCCCACCCAATTCAGGTGGTGGCTTCCTAGGCTTATTTAACACCTCAACTAGTGACTCATCCCAAAACCAAATTGTTCTAGTGGAGTTTGACACCTTTTCAAATGTTGAATGGGATCCCCCGGGGGAGCACGTGGGCATCAACGTCAATTCAATATCTTCGTCAGTACATACCGCTTGGAACGCTAGCCTTCACAGTGCTGACACTGCTGATGTATGGATTACATTCAACGCAACAACTAAGAACCTAAGCGTGTCATGGAAATACCAAACAACCTCCACTTCGCGAGAGAATACTAGCCTTTCATATCAAATTGATTTGATGAAAGTCCTGCCTGAATGGGTTACAATTGGATTCTCTGCTGCAACTAGTTATTACGTAGAACGACATGTTCTTCAATCATGGGAGTTCGATTCGACTTTGGACAAAGAGGTTACAAGTGGAAAGAAAACAAAACAGACGAAGTTGGCGGTGATTGTATCAGTTTCCGGGGCTGCTTTGATTGTGGGAACTCTTACAGCGTATGCAATATTCAGAAGGCGAAAGAGATTGAAAAGAGAGACTACGGAAAGGATGAACTTAACATCTATAGATGATGACCTGGAAAGAGGAGCAGGACCAAGAAGGTTCGGTTATAAAGACCTTGCCTTGGCCACCAACAACTTCTCCAGAGACAGAAAACTGGGTCAAGGTGGGTTTGGAGCTGTTTACAGAGGTTACTTTGCAGATTTAGACATGGCTGTTGCTGTAAAGAAAATATCAAGAGGCTCTAGACAAGGCAAAAAAGAGTACCTGACAGAGGTAAAGGTGATTAGCCGGCTAAGACACCGGAATCTCGTGCAACTCAGAGGATGGTGTCACGACAGAGGAGAATTCCTGCTTGTTTACGAGTTCATGCCAAATGGTAGCCTTGATTCTCATTTATTTGGGCAAAGGACGAATCTGTCTTGGACAATGAGGCACAAGATAGCACTTGGATTGGCGTCTGCAGTGCTGTATCTTCATGAAGAATGGGAGCAATGTGTGGTGCACAGGGATATCAAACCCAGCAATGTCATGCTAGATTCCAATTTTAATGTCAAGCTCGGTGACTTCGGGTTGGCTAAGCTCATAGACCATGAGCTGGGTCACCAAACAACTGGGTTGGCAGGAACTGCTGGCTATATGGCTCCTGAATATTTAAATACCCGTAGGGCCAGCAAAGAGTCAGATGTATATAGTTTTGGGCTGGTTGCTTTAGAGATTGCCACTGGAAGGAAGGCAGTTGATCCAGTGCAGGACAAATATAGTGAGAAGGGACTGGTTGAGTGGATATGGGATCATTATGGCAAAGATAAGCTGGTTATGGCTGTGGATGAGAGAGTGCAAACAGATTTTGATGAAAAACAAGGTGAGTGTTTGATGATTGTGGGTCTGTGGTGTTCTCACCCTGATAAAAATCAGAGGCCCTCAATAAGACAGGCAATTCAAGTGCTTAATTTTGAGGCCAACTTGCCACACCTTCCACCAAATATGCCAGTTCCTATGTATCATGCCCCTACACCATCGGAAAGCTCACAATCACAAGCTTCCATAAGTGAAAGCCTCACGATGGGTCGTTGA 1944 0.4414 MDATFFYSHTLPLFFLILSAYSIHFQISRFDPNNANILYRGDAVDRVGAIEFNNKIDYLFQVGSAIYAENVLIWDSSTGKATDFTTHFTFFIDTEGRSQYASGLAFFLAPAGFQIPPNSGGGFLGLFNTSTSDSSQNQIVLVEFDTFSNVEWDPPGEHVGINVNSISSSVHTAWNASLHSADTADVWITFNATTKNLSVSWKYQTTSTSRENTSLSYQIDLMKVLPEWVTIGFSAATSYYVERHVLQSWEFDSTLDKEVTSGKKTKQTKLAVIVSVSGAALIVGTLTAYAIFRRRKRLKRETTERMNLTSIDDDLERGAGPRRFGYKDLALATNNFSRDRKLGQGGFGAVYRGYFADLDMAVAVKKISRGSRQGKKEYLTEVKVISRLRHRNLVQLRGWCHDRGEFLLVYEFMPNGSLDSHLFGQRTNLSWTMRHKIALGLASAVLYLHEEWEQCVVHRDIKPSNVMLDSNFNVKLGDFGLAKLIDHELGHQTTGLAGTAGYMAPEYLNTRRASKESDVYSFGLVALEIATGRKAVDPVQDKYSEKGLVEWIWDHYGKDKLVMAVDERVQTDFDEKQGECLMIVGLWCSHPDKNQRPSIRQAIQVLNFEANLPHLPPNMPVPMYHAPTPSESSQSQASISESLTMGR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0930 647 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 255 IPR013320 -
Glsi09g0930 647 ProSitePatterns Legume lectins alpha-chain signature. 225 234 IPR000985 -
Glsi09g0930 647 MobiDBLite consensus disorder prediction 627 647 - -
Glsi09g0930 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Glsi09g0930 647 CDD lectin_legume_LecRK_Arcelin_ConA 23 255 IPR001220 GO:0030246
Glsi09g0930 647 Gene3D Transferase(Phosphotransferase) domain 1 413 627 - -
Glsi09g0930 647 Gene3D Phosphorylase Kinase; domain 1 321 412 - -
Glsi09g0930 647 CDD STKc_IRAK 342 607 - -
Glsi09g0930 647 MobiDBLite consensus disorder prediction 624 647 - -
Glsi09g0930 647 Pfam Legume lectin domain 23 259 IPR001220 GO:0030246
Glsi09g0930 647 ProSitePatterns Protein kinases ATP-binding region signature. 342 366 IPR017441 GO:0005524
Glsi09g0930 647 SMART serkin_6 336 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0930 647 FunFam Lectin-domain containing receptor kinase A4.3 413 626 - -
Glsi09g0930 647 Gene3D - 21 269 - -
Glsi09g0930 647 FunFam L-type lectin-domain containing receptor kinase IX.1 321 412 - -
Glsi09g0930 647 ProSiteProfiles Protein kinase domain profile. 336 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0930 647 PANTHER - 54 616 - -
Glsi09g0930 647 SUPERFAMILY Protein kinase-like (PK-like) 320 634 IPR011009 -
Glsi09g0930 647 FunFam L-type lectin-domain containing receptor kinase IX.1 21 264 - -
Glsi09g0930 647 Pfam Protein kinase domain 337 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0930 Glsi-ChrGlsi09 6464462 6466405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0930 2 625 Receptor kinase-like Gene Family AT5G10530 59.335 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi09g0930 Pkinase 8.6e-51 CL0016