Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0925 ATGTCTAACCAGAGAAGTAAGTCAATTTACAGAAAGGTCTACAAGATCTCAGATATAGGGGAAAACAATCCTCATCGGCAGCTCGGTCAACGAGAAAAACAGAAGACAAAACATATTCTTGTTCAAAACAAAAGCTTAAAACCCAAAACTCTAGAACGTACAAAAGTGGTCGACGATGATCGGAAAACGCTGTTTAAGGTTTGGTTAAGAAGGAAGAAAACTAAATGGAAGGACAAAGGTCAAAGATCATCTTCTGCAAGTGAAGGATTTGTGAGCATAGCGTGCTGTGCTGATTCAAGTTATACAGATCCACAGACCAACTTGAAGTACATATCAGATTACAATTGGTTTCCAGATAGAACAAGCTGCAAACGCTTTACCAATGAAAGTGCTCGAGTGTTTGATATAGATAGGGGAAAGAGATGTTACAACTTGCCAACAATTAAGGACCAAGTATATCTGTTAAGGGGCACATTTCCGTTTGACAATTTACTTACTAATTCTAGGGATTCTTCCTTTGATGTTTCAATTGGTGTGACACCATTAGGTGCAGTAAAACCAGTCCAGGACTTCGAAATTATTGAGGGAATCTTCAGAGCTACTAAGAACTACATAGACTTCTGCTTAGTAGAGAAGGAGGAGGGGAAACCTTATATTTCTCGGGTTGAATTAAGGCCATCGCATGAAAAGTACTTGCAGGGTCTCCCTTCTAGTGTTATAAAAGTGATCAACAGAAATAATCTAGGAGGCACAGGAAATGACATCAGGTACCCAATTGACCCAAATGACAGAATCTGGAAAGAAACTTCAAGTTCGTTATCAGCTTCCATATCATCATTCAATGCCAGCATTTCAGGCCACGATGCTAATGTGACTCCTCCACTTCCAGTCTTACAAACAGCTCTTACCCATCCCGAGCGATTGGAATTCGTTCACAATGGCCCCGAGACATGGAACAATGAATACCGTGTGTTTCTTTACTTCCTCGAATTAAGTGACACTCTTAGATCAGGCCAAAGGGTGTTTGACATCTATGTTAACAGTGAGATTAAAGAGGAGAGATTTGATATATTAGCTGGTGGGTCCAACTATAGATACACTGTTTTCAACGTTACTGCAAATGGGCCCCTCAATTTAACCTTTATCAAGGCATCTGGGTCTGAATATGGACCCCTTTGTAACGCATACGAGATCCTGCAGGTGTTTCCATGGATGGAAGAGACCAACCAAGTAGACATGAAAGAAATGTGGAAGGTGACAGAAGAGTTAATGGTGCAAAACCACGGCAATAAAGCGCTGGAGAGTTGGAGTGGTGACCCATGTATTCTTTTTCCTTGGCAAGGGGTACAATGCGATCGTTTAGGTGGTTCACCTGTTATCACTAAGCTGAACCTGAGTCACAATAGCTTCAACGGCAATGTTCCCCCATTTCCACCTTCCTCGTCGCTGACATCAGTATATTTTGGCTGCAATCGTCATATGAGCAACGAGGTTCCATCAAACTTGAATATTTCATTCAATACAGATTATGGAAGATGCACGTCTAAAGGATCAGGAATTTCACAACAACTCATCATTGGCACCGCCACATGTGGATCGCTCTTGCTTACTTTGGCTGTTGGATTTATTTTTGTTAGTCATTATAAGAAAAAAATAGTTCCCTGGGGAGGATTTGGTGGAAAGAAGTACCCAATGGCAACCAATGTAATTTTCTCTTTGCCCAGTAAAGACGATTTCTTCATGAAATCAGTATGTATTCAAACATTTACCCTGGATTATATAGAGGCTGTCACCGGGAAGTACAAAACTTTAATAGGTGAAGGAGGGTTTGGGTCTGTTTACAGGGGCATTCTAGATGATGGTCAAGAAGTGGCAGTGAAAGTCCGGTCGGCCACATCAACTCAGGGAACTCGAGAATTTGACAATGAGATTTCTACATCATGCCGTCTAACTAGGTTACGATGCATCTTGCAGCTAAATCTGCTTTCTGCAATCTGGCATGAAAATCTGGTGCCTCTTCTCGGTTACTGTCGTGAAAATGATCAACAAATTCTCGTAGCAGATTTTGGTTTCTCAAAGTATGCTCCTCAGGAAGGAGACAGTGTTTCTCTTGAAGTAAGAGGAACAGCTGGATATCTAGATCCCGAGTACTACACTACCCAGCAGTTATCTGCCAAGAGTGATATCTTTAGCTTTGGTGTGGTTCTACTAGAAATTGTGAGTGGTCGGGAACCTCTCAACATTCGTAGACCACGAAATGAGTGGAGCTTGGTTGAATGGGCTAAACCATTTGTAAGGGAGGCAAAGATAGATGAAATTGTAGATCCTGGCATCAAGGGAGGATACCATGCGGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTCTCATGTACTGAACCCTTCTCAGCATATCGACCTAGCATGGCTGACATTGTGCGTCAGTTGGAGGATGCTCTCATTATAGAAAACAATGCATCTGAATTCATGAAGTCCATAGACAGCCTAGGAGGATCCAATCGCTACTCCATCGTAATAGAGAAAAGGGTGCTACCCCCAACTCTGTCTACAACAGAATCAACCATCACAAACCAAACCTTGTCCCTCCCACAGCCGTAA 2616 0.4224 MSNQRSKSIYRKVYKISDIGENNPHRQLGQREKQKTKHILVQNKSLKPKTLERTKVVDDDRKTLFKVWLRRKKTKWKDKGQRSSSASEGFVSIACCADSSYTDPQTNLKYISDYNWFPDRTSCKRFTNESARVFDIDRGKRCYNLPTIKDQVYLLRGTFPFDNLLTNSRDSSFDVSIGVTPLGAVKPVQDFEIIEGIFRATKNYIDFCLVEKEEGKPYISRVELRPSHEKYLQGLPSSVIKVINRNNLGGTGNDIRYPIDPNDRIWKETSSSLSASISSFNASISGHDANVTPPLPVLQTALTHPERLEFVHNGPETWNNEYRVFLYFLELSDTLRSGQRVFDIYVNSEIKEERFDILAGGSNYRYTVFNVTANGPLNLTFIKASGSEYGPLCNAYEILQVFPWMEETNQVDMKEMWKVTEELMVQNHGNKALESWSGDPCILFPWQGVQCDRLGGSPVITKLNLSHNSFNGNVPPFPPSSSLTSVYFGCNRHMSNEVPSNLNISFNTDYGRCTSKGSGISQQLIIGTATCGSLLLTLAVGFIFVSHYKKKIVPWGGFGGKKYPMATNVIFSLPSKDDFFMKSVCIQTFTLDYIEAVTGKYKTLIGEGGFGSVYRGILDDGQEVAVKVRSATSTQGTREFDNEISTSCRLTRLRCILQLNLLSAIWHENLVPLLGYCRENDQQILVADFGFSKYAPQEGDSVSLEVRGTAGYLDPEYYTTQQLSAKSDIFSFGVVLLEIVSGREPLNIRRPRNEWSLVEWAKPFVREAKIDEIVDPGIKGGYHAEAMWRVVEVALSCTEPFSAYRPSMADIVRQLEDALIIENNASEFMKSIDSLGGSNRYSIVIEKRVLPPTLSTTESTITNQTLSLPQP 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0925 871 ProSiteProfiles Protein kinase domain profile. 520 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0925 871 Gene3D Ribonuclease Inhibitor 414 515 IPR032675 -
Glsi09g0925 871 Gene3D Phosphorylase Kinase; domain 1 584 660 - -
Glsi09g0925 871 Pfam Protein kinase domain 680 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0925 871 SUPERFAMILY Protein kinase-like (PK-like) 586 815 IPR011009 -
Glsi09g0925 871 ProSitePatterns Protein kinases ATP-binding region signature. 605 627 IPR017441 GO:0005524
Glsi09g0925 871 Pfam Malectin-like domain 97 401 IPR024788 -
Glsi09g0925 871 PANTHER OS07G0107800 PROTEIN-RELATED 91 686 - -
Glsi09g0925 871 Gene3D - 240 401 - -
Glsi09g0925 871 Gene3D Transferase(Phosphotransferase) domain 1 661 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0925 Glsi-ChrGlsi09 6414875 6423380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0925 84 819 Receptor kinase-like Gene Family AT1G07550 27.590 6.71e-63 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Glsi09g0925 Malectin_like 6.5e-48 CL0202