Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0916 ATGGCCTTAAATCCTCTTCTTCATTCGAGAAAATTATTTGGTCGGTTATCTCTTGTTCTACTTGAAACCGCAATGCGGGACTATGATAGAGATGAATTACAGGATTATGATGATTATGAGGATTACGAGGATGAGGGACAAGAGCAAGGGGATGAATATGAAGAGGAGGAATATGAAGATAAAGAGCCTCGTAAGCCAACACAGCAAGAACTGGAGTATCTTGAATTGAGGCAGAAGTTAAAAGAATCAATCAGAAATCAGATGAAGAAGGAGAGTAGTTCTTCCCTTGCGGGTTCCAGTGAAAGAAAGAAGAAGCTTCCTTACGATAATTACGGATCTTTTTTTGGCCCTTCTCAACCAGTTATTGCACAAAGAGTAATCCAAGAGAGCAAGTCGTTGTTAGAAAACCAGCATTTGAGGTCTAGGCTTTCTAACTCACTTCATATCAACAAGAACAAGAATAAAGTATCAAGTGGAGGATCAAAATCTTCAGTTCATAATCAACTGCCCAAAGTGAGCGAGTCGAAAGTTAAGGCCCAGAAACTCAAGGATACAAGAGATTACTCCTTTCTTCTTTCCGATGATGCAGAGCTTCCAGCTCCTCCAAAAGAGCCTCCACCTCGGAATGTTTCTGTTAGAAATTCTGAGCCACGACCAGCTCATGTACATGGGAAGAGTAAACAACTTTCTAGTAATGGTGGGAAGCCTGTTCATGGTGGTCGTGAGGACAGGAAGGTAGTTTCTGTGCCTGGCCAATTACCTCCTAAATCAGCGTCCAATAATAAGTTAACCTCTACCAGTAAGCCCAGTATGACATTAGCAGATTCTAGAAAACAGCTTGGTAATAACAGTGGAAATGGACCAGGCCGGCCAGTGGCACGGAAAGGCTTGCCATCAAGGACACCTGCTGGTACCATGGCGAATAAGTCTTCAACCCCTGGTATAAAAAATCCTATAAATGGTGTGCAGAAACCACTCCCTTCTAAGGTTCATTCATCCATTTCAAATCAGAGTGTGGTTCAAAGAAAAGACCCAAGAGAACTGAATAAGCCTAGAATGACACCAAAACAACCAGTCACAACATCAAAAGCTCAGATAAATAAGCCACTTAACCGGAATCCAGCTCATCTGGCTTCGCAAGATTACCTCCCCAAGAAGAAGCCTGTAAAACGGTATCCTAGTGACGATGACGAGGATACGAAGGCTATTAATATGATTAGAAATATGTTCAATTACCGGCCCGACAGGTTCCTTGATGACGACGACGATGATGATTGCGATATGGAGGCAGGCTTTGATGAAATCATGAAAGAGGAAAGGAGGAGTGCTAAAATTGCCAAAAAGGAGGATGAAGAGCAACTTCGGCTAATAGAGGAGGAGGAGGAAAGACAGCGGAAGATACGATTGGCAAAGTCAAAGAAGCATCGTTTATCTGATTTGATTCATTTTCGTTCTGTTTTTCATCTATTTCTTTGGGACCCAGCTAATAGCTCGATGGGAGACGTGGCTAAGGACCTTGCTGCTGGGACAGTAGGAGGGGCAGCACAATTGATATGTGGTCACCCTTTTGACACCATTAAGGTCAAGCTCCAAAGCCAGCCTACACCACTCCCTGGCCAAGCTCCCAAGTATTCTGGTGCCATTGATGCTGTCAAGCAAACAGTAGCAGCTGAAGGACCGAGGGGTTTATACAAAGGTATGGGTGCTCCACTTGCAACAGTAGCAGCCTTCAATGCTGTCCTGTTCACAGCGAGGGGACAGATGGAGACGTTATTGAGGTCCCATCCTGGTGCCCCACTTACAGTAAACCAGCAGGTTGTTTGTGGAGCTGGGGCTGGAGTTGCTGTTTCCTTTCTAGCCTGCCCCACTGAACTGATCAAATGCAGGCTGCAAGCACAAAGTGCACTTGCTGGTTCTGGAACAGCTGCTGTGGCTGTAAAGTATGGAGGACCCATGGATGTGGCCAGGCAAGTTCTCAGGTCAGAAGGGGGCGTTAAAGGTCTTTTTAAGGGCTTGGCTCCCACTATGGCACGTGAGATACCTGGAAATGCTGCAATGTTCGGTGTATATGAAGCAGTAAAGCAGTTAATTGCAGGAGGCCAAGATACTTCTGGGCTTGGTAGAGGATCTTTGATTGTTGCTGGAGGCTTGGCGGGAGGTTCCTTCTGGTTCATGGTTTACCCAACTGATGTTATCAAGAGCGTGATTCAGGTAGATGATCACAAAAATCCGAAGTATTCTGGTTCAATTGATGCTTTTAGAAAGATTCGAGCTTCAGAGGGGTTCAAAGGCCTGTATAAGGGTTTTGGTCCTGCAATGGCTCGAAGTGTTCCTGCAAATGCTGCATGCTTCTTGGCATATGAGATGACAAGAGCGGCTCTGGGGTGA 2388 0.4523 MALNPLLHSRKLFGRLSLVLLETAMRDYDRDELQDYDDYEDYEDEGQEQGDEYEEEEYEDKEPRKPTQQELEYLELRQKLKESIRNQMKKESSSSLAGSSERKKKLPYDNYGSFFGPSQPVIAQRVIQESKSLLENQHLRSRLSNSLHINKNKNKVSSGGSKSSVHNQLPKVSESKVKAQKLKDTRDYSFLLSDDAELPAPPKEPPPRNVSVRNSEPRPAHVHGKSKQLSSNGGKPVHGGREDRKVVSVPGQLPPKSASNNKLTSTSKPSMTLADSRKQLGNNSGNGPGRPVARKGLPSRTPAGTMANKSSTPGIKNPINGVQKPLPSKVHSSISNQSVVQRKDPRELNKPRMTPKQPVTTSKAQINKPLNRNPAHLASQDYLPKKKPVKRYPSDDDEDTKAINMIRNMFNYRPDRFLDDDDDDDCDMEAGFDEIMKEERRSAKIAKKEDEEQLRLIEEEEERQRKIRLAKSKKHRLSDLIHFRSVFHLFLWDPANSSMGDVAKDLAAGTVGGAAQLICGHPFDTIKVKLQSQPTPLPGQAPKYSGAIDAVKQTVAAEGPRGLYKGMGAPLATVAAFNAVLFTARGQMETLLRSHPGAPLTVNQQVVCGAGAGVAVSFLACPTELIKCRLQAQSALAGSGTAAVAVKYGGPMDVARQVLRSEGGVKGLFKGLAPTMAREIPGNAAMFGVYEAVKQLIAGGQDTSGLGRGSLIVAGGLAGGSFWFMVYPTDVIKSVIQVDDHKNPKYSGSIDAFRKIRASEGFKGLYKGFGPAMARSVPANAACFLAYEMTRAALG 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0916 795 MobiDBLite consensus disorder prediction 138 381 - -
Glsi09g0916 795 SUPERFAMILY Mitochondrial carrier 500 788 IPR023395 -
Glsi09g0916 795 MobiDBLite consensus disorder prediction 138 174 - -
Glsi09g0916 795 MobiDBLite consensus disorder prediction 253 286 - -
Glsi09g0916 795 ProSiteProfiles Solute carrier (Solcar) repeat profile. 706 793 IPR018108 -
Glsi09g0916 795 PANTHER YEAST SPT2-RELATED 33 473 - -
Glsi09g0916 795 MobiDBLite consensus disorder prediction 30 111 - -
Glsi09g0916 795 MobiDBLite consensus disorder prediction 176 191 - -
Glsi09g0916 795 MobiDBLite consensus disorder prediction 354 374 - -
Glsi09g0916 795 ProSiteProfiles Solute carrier (Solcar) repeat profile. 600 696 IPR018108 -
Glsi09g0916 795 MobiDBLite consensus disorder prediction 59 88 - -
Glsi09g0916 795 SMART spt2 373 471 IPR013256 -
Glsi09g0916 795 MobiDBLite consensus disorder prediction 303 318 - -
Glsi09g0916 795 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 500 794 - -
Glsi09g0916 795 Coils Coil 440 467 - -
Glsi09g0916 795 Coils Coil 39 59 - -
Glsi09g0916 795 MobiDBLite consensus disorder prediction 33 58 - -
Glsi09g0916 795 Pfam Mitochondrial carrier protein 712 794 IPR018108 -
Glsi09g0916 795 Pfam Mitochondrial carrier protein 502 593 IPR018108 -
Glsi09g0916 795 Pfam Mitochondrial carrier protein 601 698 IPR018108 -
Glsi09g0916 795 ProSiteProfiles Solute carrier (Solcar) repeat profile. 500 591 IPR018108 -
Glsi09g0916 795 Pfam SPT2 chromatin protein 389 466 IPR013256 -
Glsi09g0916 795 Gene3D Mitochondrial carrier domain 494 794 IPR023395 -
Glsi09g0916 795 MobiDBLite consensus disorder prediction 326 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0916 Glsi-ChrGlsi09 6322596 6338801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0916 520 794 Antiporters AT1G79900 34.043 6.78e-38 141