Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0897 ATGGCACCTTCATTCCGTCCAAGCGATAACACTGTCTGTGTAATGGATGCTTCGGGGCAGCCAGGCTTCACTCTGGTCAAGCGCCTCCTTCGAAGAGGCTACAACGTCCACGCCTCCCTTCAACACCATGGCGAAGAGCTTTTCGGTGGGATTTCTGCCGATCCCAATAGCCTCAAGATTTTCCGCTCAGACCCATTTGATTACCATAGCATAATCAATGCACTCAGAGGCTGCTCTGGCTTGTTCTACACATTCGAACCTCCTCAAGACCAGCCCAACTATGACGAATACATGGTAGATGTGGAGGTGAGGGCTGCGCACAACGTGCTTGAAGCCTGTGCTCAAACCGAAACCATACACAAAGTCGTTTTCACATCCTCCGCAACGGCAGTTGTTTGGAGGGAGGACCGCAAGTCGTTGCAATTGGACTTGGACGAGAGACATTGGAGCGATGTTAATCTCTGTCGCAAATTCAAGTTATGGCATGCGATGTCAAAGACGGCAGCGGAGAAAGCAGCGTGGGCCTTGGCAATGGACCGTGGTGTTCATATGGTGTCCATCAACGCAGGCCTGTTGATGGGCCGTGATCTGTCCATGAAGAGCCCGTATATGAGAGGAGCGGCTGAGATGTACGAAGATGGGGTGTTGGTGACCGTTGATCTAGACTTCTTAGTAGATGCCCACGTTTGCGTCTACGAAGATGTCTCGTCCTACGGTCGTTACTTGTGCTTCAATCACATCATCAACACACACGACGGCGCCGTTCAGCTCGCCAGCAGCTTAACCCCTTCCGAACCTAACTTGCCACAAAGGTACGAGCAGGGAAAAAGCTTTCTCCAACAAAGGATAAGCAACGACAAGTTGAACAAATGGATGGTGGACTTTGAGGGTTGA 894 0.5112 MAPSFRPSDNTVCVMDASGQPGFTLVKRLLRRGYNVHASLQHHGEELFGGISADPNSLKIFRSDPFDYHSIINALRGCSGLFYTFEPPQDQPNYDEYMVDVEVRAAHNVLEACAQTETIHKVVFTSSATAVVWREDRKSLQLDLDERHWSDVNLCRKFKLWHAMSKTAAEKAAWALAMDRGVHMVSINAGLLMGRDLSMKSPYMRGAAEMYEDGVLVTVDLDFLVDAHVCVYEDVSSYGRYLCFNHIINTHDGAVQLASSLTPSEPNLPQRYEQGKSFLQQRISNDKLNKWMVDFEG 297
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0897 297 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 172 IPR002225 GO:0003854|GO:0006694|GO:0016616
Glsi09g0897 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 266 IPR036291 -
Glsi09g0897 297 CDD FR_SDR_e 12 290 - -
Glsi09g0897 297 Gene3D - 5 297 - -
Glsi09g0897 297 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 285 - -
Glsi09g0897 297 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 297 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi09g0897 Glsi-ChrGlsi09 6215825 6217718 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0897 11 288 Monolignol Biosynthesis Gene Families AT5G58490 32.566 2.57e-39 138