Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0887 ATGGTTGCAGTGAAGCTCATGAAGATGGAGGCGACCTTAGCTTTGTCATGGAATACATGGAAGGAGGATCGTTGCATGAAGTGTTACGAGAACACCATGGACTGCCAGTGGAGATTTTGGAGTGAGTCACGTAGTGGAAGTAGGTTTGAGGCATCTGAGTTCAACGCAGGTACATGTGCCTACATGAGCCCAGAAAGAGTTGATCCAGATAGCTGGGGTGGTGAAAATGCCGATGGGTTTGCCGGGGATGTGTGGTCACTGGGAGTGGTGATGTTAGAATGTCTTCTCGGTCACTTTCCCTTGATCGGTCCAGGCCAGAAACCAGATTGGGCAACATTAATGTGGGCAATTTGCTTTGGGGAGAATCTGGAGTTGTCAGAGAAGGCATCGCCTGAGTTCAAAAATTTTGTGCGGAGATGTCTAGAGAAGCAGGGGCGGAGCATCGTTGAGCTTTGA 456 0.4934 MVAVKLMKMEATLALSWNTWKEDRCMKCYENTMDCQWRFWSESRSGSRFEASEFNAGTCAYMSPERVDPDSWGGENADGFAGDVWSLGVVMLECLLGHFPLIGPGQKPDWATLMWAICFGENLELSEKASPEFKNFVRRCLEKQGRSIVEL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0887 151 SUPERFAMILY Protein kinase-like (PK-like) 54 143 IPR011009 -
Glsi09g0887 151 Gene3D Transferase(Phosphotransferase) domain 1 26 147 - -
Glsi09g0887 151 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 56 144 - -
Glsi09g0887 151 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0887 151 Pfam Protein kinase domain 55 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0887 Glsi-ChrGlsi09 6125164 6125746 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0887 57 150 MAP Kinase Kinase Gene Family AT1G32320 59.375 2.45e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Glsi09g0887 Pkinase 5.6e-10 CL0016