Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0871 ATGGAGCTATTCCCAGCACAGCCAGATTTGTCCTTGCAAATTAGCCCTCCAAACAGCAAACCCACATCAGGTTGGAGAGGTAATACAGAAGAGGTGGATTTGGGGTTCTGGAAGAGAGCTCTGGACACCAGAAGCAGAAGCTCCTTATCATCAATGGCCAAAACTGATCATAATAACTTGTTCGAGCTCTCACTCTCCAATCCAAGGGCTTCCTCCTTAGACTCTAACACATCCTCCAACCTTATTCACCACTTCCAAAACGCTAACACCAATCCCTTACAGTCCTTTCACCAAAACAACTGCTCTTACGTCCACCAACAACACCAGCTTCGCTTCCAGCAACAACCACACCACCAAAGCTTTACCCAAGACCTGGGTTTTCTCAGACCCATTAGAGGAATTCCAGTGTACCAACACCCTCCTCCTCCTCCTCCTATTTCCTTTTCTCAACAGCCTTTAGATGCTTCCGCTGCTCAATCTATATCCAACACGACCACAAGTTCAAGCCCTTTTCAGTCTCATCAAAGTTTGATGCGGTCGAGGTTCTTGTCTCGCTTTCCTGCTAAGCGCAGCATGAGAGCTCCTCGGATGCGTTGGACTACAACGCTCCATGCTCGCTTTGTTCATGCCGTTGAGCTATTAGGTGGCCATGAAAGGGCTACACCCAAATCTGTTCTTGAGCTAATGGATGTGAAGGATCTTACTTTAGCGCACGTTAAATCTCATTTGCAGATGTATCGGACGGTGAAAACCACAGATAGAGCAGCAGCTTCTCCAGGGCACTCTGATTTGTATGATAATGGGTCATCCGGAGATACTTCTGAAGAATTAATGTTTGACATGAACAATTCAAGAAGGTCCGATTTATCTATTAAGCAGGGAAGACAAAGTGTTAATCAAGAAAAGGAATATCATCATGGACTTTGGAGCAACTCTTCCAGAGAAGCTTGGTTGCATGGCAAGCCAAAGGTCGATTCTGTTGGAAACGTGCCTTCTCTTGAGAAGGAGATCGATCCAAAGTGCCTTAGCTACGAGATAATATCAGATAGAAGCTCGTCTTCTAACTTTTCAGGATCAAGCCCCAAGAAGCCTAATCTGGATTTGGAGTTCACCTTGGGCCAGCCACTTTAA 1131 0.458 MELFPAQPDLSLQISPPNSKPTSGWRGNTEEVDLGFWKRALDTRSRSSLSSMAKTDHNNLFELSLSNPRASSLDSNTSSNLIHHFQNANTNPLQSFHQNNCSYVHQQHQLRFQQQPHHQSFTQDLGFLRPIRGIPVYQHPPPPPPISFSQQPLDASAAQSISNTTTSSSPFQSHQSLMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASPGHSDLYDNGSSGDTSEELMFDMNNSRRSDLSIKQGRQSVNQEKEYHHGLWSNSSREAWLHGKPKVDSVGNVPSLEKEIDPKCLSYEIISDRSSSSNFSGSSPKKPNLDLEFTLGQPL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0871 376 NCBIfam myb-like DNA-binding domain, SHAQKYF class 195 248 IPR006447 GO:0003677
Glsi09g0871 376 MobiDBLite consensus disorder prediction 150 176 - -
Glsi09g0871 376 MobiDBLite consensus disorder prediction 1 27 - -
Glsi09g0871 376 SUPERFAMILY Homeodomain-like 192 248 IPR009057 -
Glsi09g0871 376 MobiDBLite consensus disorder prediction 11 26 - -
Glsi09g0871 376 MobiDBLite consensus disorder prediction 350 364 - -
Glsi09g0871 376 Pfam Myb-like DNA-binding domain 196 247 IPR001005 -
Glsi09g0871 376 Gene3D - 194 251 - -
Glsi09g0871 376 FunFam Myb family transcription factor 193 251 - -
Glsi09g0871 376 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 375 IPR044847 GO:0000976|GO:0006355|GO:0010158
Glsi09g0871 376 MobiDBLite consensus disorder prediction 350 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0871 Glsi-ChrGlsi09 5967899 5971927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0871 1 375 G2-like Transcription Factor Family AT4G17695 38.071 2.16e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi09g0871 Myb_DNA-binding 1.8e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0871 09 5967899 5971927 Glsi09g0871 09 5967899 5971927 ECH