Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0859 ATGGAGAGAGAAGCAGAGCAAGAACAAGAAGCTCTCCACTTCAAAGCCATCGCAGAAGCCAAATACAAAAGCTCCCACCTCAAATCTGCTTTGAAATATGCCAAGCGAGCTCAACGCCTTGCCCCAGACCTCGATGGTCTCTCCGAAATGGTCACCTCCTTGGACATCCTCCGCGTCGCCTCCAAATCACTCACTCCTGACTGGTACAAGATACTCCAAGTTGAGCCCTTTGCTCCCTTCAACGCCATTCGGAAGCAGTATAAGAAGCTAGCTTTGATTCTTCACCCGGATAAGAATTCCTGTGTGGCTTCCGAGGAGGCGTTCAAGCTCGTTAGCGAGGCCTTTCGATTTCTCTCTGATAAAATTCGGAGGAAGGAGTACGATATGAAGTTGAGGATTCGGATTCAGGAGGAGGCTACTGAGGCTTTGAATCAGGGGGAGACTTTCTGGACGGCGTGCTGCACTTGCCGGCTGCTGCACCAATTTGAGAGGAGGTATGTGGGTCATAATTTGGTGTGCCCTAGTTGCAAGAAGAGTTTTAAGGCTGTGGAGGTTGAGAATAATGAGTCTGAGGATGAGGATAAGGATGAGGAGAAGATGAGGGTTAGGAACAGAAGTGGGAGATTGAGGATTTCGAGCTTGAAGCGGAAGGAGGCTGGCAGTGAGAGAGTCAAAGACATGACCTTAAGGAGGAAAATGAGTAGTGTTGGGAAATCGCGGAGCGTGAAGGCGAAAGTGGATACTGAAGAAGTCGAACGTGTGACCACCAAGAGTGGAATATCAAAGGGTAAAGTCGGAGGTGCTGAAGTGAGAAACGGGGATTTGGATAGGGAAGGAGCTATTGGTGAATGGGGTGGGGGAAGATTGAGAAGTGGGGGTTTAAGGAGGAGAATGAGTACTGTTGGGGATGTTTTGGAAAGGTCTAATCCAAAGAAAATCAAAACTGGGGACGAGATGATGACATTAGCGGAAATGCAGTCTGAAATGAAGAGAAAGGTGCAGCAACAGAAGATGACATCAAAGCTAAAGGAAAAGGAGGAGGATAAAACGAAGAAGAGGAGCAAGCGGGAGGAAATACAAGAGGCTTCAAAAAATTCTAAGGCTTCAGCGGTTGTCAAACCAAGAAGGTCTAAGAGCGTGAAGCTAGCAATTGAAGAGACGCCCGAATCTTCTAAGAGTAAAGGAATGAAAATTGAGAAGCACAGGGATACAAGTGAAGAGGACTTGGAAAATATGGCAGTGGAGGATTCAGACTTTTATGATTTTGACAAAGATAGAGTCGAGAAAAGCTTTAAGAAAGGGCAGGTGTGGGCGGTTTATGATGATGATGATGGAATGCCAAGGCATTATGCCTTGATTGATGAAGTTGTCTCAGTTAATCCTTTTGAAGTAAGAATAAGTTGGCTAGATCTACAAAACAATGGGGATGAAAAGATAATTAGTTGGGAGAAAATGGGGTTTCGTATATCTTGTGGGAGATTTAAAGTTGCCAGGAAGACTTCCATAAATTCAGTAAATATCTTTTCACACGTTGTAGATTGTGAACGGGCAGCTCGTGAGGTTTACAGAATTTATCCTAAGAAGGGTTCTGTGTGGGCACTTTATAATGAGGCAGCCCTTGAAGCAGAGGGAAGAAGTCTTGCAATTGAGGCCAAGAGGTGCTATGACATTGTTATATTTTTGACAAGTTACAGTGAGATGACTGGATTAAGCATGGCATATCTTGAGAAAGTCAATGGTTACAAGACAGTATTTAAGAGACTAGAGGTGGGGAGTCGTGCTATTAAATTGCTTGGAAGAGATGATATCCGATTAATTTCGCACCAAATTCCTGCACAGAAACTTTCTGGTATTGAGACTCCTGAACTTTTGAGAGACTATTGGGAACTTGATCCTGCATCACTTCCTGCAGATTTACTTAGGCTTACATAA 1932 0.4451 MEREAEQEQEALHFKAIAEAKYKSSHLKSALKYAKRAQRLAPDLDGLSEMVTSLDILRVASKSLTPDWYKILQVEPFAPFNAIRKQYKKLALILHPDKNSCVASEEAFKLVSEAFRFLSDKIRRKEYDMKLRIRIQEEATEALNQGETFWTACCTCRLLHQFERRYVGHNLVCPSCKKSFKAVEVENNESEDEDKDEEKMRVRNRSGRLRISSLKRKEAGSERVKDMTLRRKMSSVGKSRSVKAKVDTEEVERVTTKSGISKGKVGGAEVRNGDLDREGAIGEWGGGRLRSGGLRRRMSTVGDVLERSNPKKIKTGDEMMTLAEMQSEMKRKVQQQKMTSKLKEKEEDKTKKRSKREEIQEASKNSKASAVVKPRRSKSVKLAIEETPESSKSKGMKIEKHRDTSEEDLENMAVEDSDFYDFDKDRVEKSFKKGQVWAVYDDDDGMPRHYALIDEVVSVNPFEVRISWLDLQNNGDEKIISWEKMGFRISCGRFKVARKTSINSVNIFSHVVDCERAAREVYRIYPKKGSVWALYNEAALEAEGRSLAIEAKRCYDIVIFLTSYSEMTGLSMAYLEKVNGYKTVFKRLEVGSRAIKLLGRDDIRLISHQIPAQKLSGIETPELLRDYWELDPASLPADLLRLT 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0859 643 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Glsi09g0859 643 Gene3D DnaJ domain 57 154 IPR036869 -
Glsi09g0859 643 MobiDBLite consensus disorder prediction 330 363 - -
Glsi09g0859 643 PANTHER BNAC03G44070D PROTEIN 7 636 - -
Glsi09g0859 643 MobiDBLite consensus disorder prediction 327 407 - -
Glsi09g0859 643 Pfam Domain of unknown function (DUF3444) 411 617 IPR024593 -
Glsi09g0859 643 SUPERFAMILY Chaperone J-domain 65 132 IPR036869 -
Glsi09g0859 643 PRINTS DnaJ domain signature 87 102 IPR001623 -
Glsi09g0859 643 PRINTS DnaJ domain signature 103 123 IPR001623 -
Glsi09g0859 643 PRINTS DnaJ domain signature 69 87 IPR001623 -
Glsi09g0859 643 CDD DnaJ 67 120 IPR001623 -
Glsi09g0859 643 Coils Coil 342 365 - -
Glsi09g0859 643 SMART dnaj_3 66 123 IPR001623 -
Glsi09g0859 643 MobiDBLite consensus disorder prediction 378 407 - -
Glsi09g0859 643 MobiDBLite consensus disorder prediction 187 206 - -
Glsi09g0859 643 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0859 Glsi-ChrGlsi09 5882715 5884646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0859 1 197 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.439 4.39e-24 102