Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0839 ATGTTTAGAACATTAGCAGTATTTGACTATCTGGCACTTGGTAGGAAGAGACAGCTTGACATCTGTGGCTATGAAGAATATGCTCATTACGTACCTTCCCACTTCACCCATTTTGCTGATGTCAAATATTTTCTTTTTCTGCCCAACAAACGGCCTTTGGTTTCCATTCCACCTCTTATTTTATTTGTGTTCCAAACTTCTTCTTGGAATGCCCCATTCCATCATCTTCCAACAAAAGCCAACTTAAACTCTCAAAATCCTCTGAACTTCTCTCTTCTTAGAGAGAAAGAGCGGAAAACAATGGCAGCTTGCGCAGTCTACACAGCAACACAATCTCTCAACACAAACTGCTCGATCTCAACACCATCAAAAGCACATTTGGGTTTTCATCAGAGGCAGCTAGTCTTCTACACTAGCACAGGCAGGAGAAGCAGCAGCAAGAGAAGAAGCGGCTCATGTACTGTGATAACATGTGTAGCAGGAGACCAGACAGTGGTGATTGGTCTGGCAGCTGATTCAGGGTGTGGGAAGAGCACCTTCATGAGAAGGCTGACCAGTGTGTTTGGAGGCGCAGCAGAGCCACCAAAAGGTGGGAACCCAGATTCCAACACCCTCATCAGTGACACCACCACTGTCATATGCTTGGATGACTATCATTCATTGGATAGAACTGGAAGAAAGGAGAAGGGAGTCACTGCGCTTGACCCAAGAGCCAACGATTTCGATCTCATGTACGAGCAAGTTAAGGCTCTCAAGGATGGAATTGCTGTTCAGAAACCAATTTATAACCATGTCACTGGTCTCTTAGATCCCCCTGAGCTCATCAAACCTCCCAAAATCTTGGTCATTGAAGGTTTGCACCCAATGTTTGATCCTCGGGTCAGAGACCTCTTGGACTTCAGCATCTACCTAGACATCAGCAATGAGGTGAAATTCGCTTGGAAAATCCAGAGAGACATGGCAGAGCGAGGGCATAGCCTTGAAAGCATCAAAGCTAGCATTGAAGCACGGAAGCCTGATTTTGATGCTTATATTGATCCTCAAAAGCAATATGCAGATGCAGTGATAGAAGTGCTGCCAACCCAACTCATTCCAGATGATAATGAGGGGAAGATTTTAAGAGTGAGGTTGATACAGAAAGAAGGGGTTAAATATTTTAGTCCTGTTTACTTGTTTGATGAAGGCTCTACCATTTCATGGATTCCATGTGGAAGGAAGCTTACCTGCTCTTATCCTGGCATTAAATTCGTCTATGGCCCCAAGACTTACTATGGTCATGAGGTTTCAGTTGTGGAGATGGATGGCCAATTTGACAGACTCGATGAACTAATATACGTTGAGAGCCATCTAAGCAATCTCTCTACCAAGTTCTATGGAGAGGTTACACAGCAGATGTTGAAGCATGCTGACTTCCCAGGCAGCAGCAATGGGACTGGTCTTTTCCAAACCATAGTTGGTTTGAAGATAAGAGATTTATTTGAGCAGATAACAGCCAGCAGGGCTAAGGCAACAGTGGGAGCAGCAAAAGCTTAG 1533 0.4455 MFRTLAVFDYLALGRKRQLDICGYEEYAHYVPSHFTHFADVKYFLFLPNKRPLVSIPPLILFVFQTSSWNAPFHHLPTKANLNSQNPLNFSLLREKERKTMAACAVYTATQSLNTNCSISTPSKAHLGFHQRQLVFYTSTGRRSSSKRRSGSCTVITCVAGDQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKALKDGIAVQKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDPRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFVYGPKTYYGHEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSSNGTGLFQTIVGLKIRDLFEQITASRAKATVGAAKA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0839 510 CDD PRK 166 455 - -
Glsi09g0839 510 Pfam Phosphoribulokinase / Uridine kinase family 166 364 IPR006083 GO:0005524|GO:0016301
Glsi09g0839 510 PANTHER URIDINE KINASE 154 406 - -
Glsi09g0839 510 PRINTS Phosphoribulokinase family signature 171 188 IPR006082 GO:0005524|GO:0005975|GO:0008974
Glsi09g0839 510 PRINTS Phosphoribulokinase family signature 333 356 IPR006082 GO:0005524|GO:0005975|GO:0008974
Glsi09g0839 510 PRINTS Phosphoribulokinase family signature 280 298 IPR006082 GO:0005524|GO:0005975|GO:0008974
Glsi09g0839 510 PRINTS Phosphoribulokinase family signature 315 332 IPR006082 GO:0005524|GO:0005975|GO:0008974
Glsi09g0839 510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 434 IPR027417 -
Glsi09g0839 510 FunFam Phosphoribulokinase 161 391 - -
Glsi09g0839 510 Gene3D - 161 395 IPR027417 -
Glsi09g0839 510 ProSitePatterns Phosphoribulokinase signature. 315 328 IPR006082 GO:0005524|GO:0005975|GO:0008974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0839 Glsi-ChrGlsi09 5781235 5784861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0839 218 392 PRT Gene Family AT3G27440 27.528 2.68e-17 82.4