Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0822 ATGGCCGAACTTAAGGAGAAGAAGAGTGAAATGAGCGCTCCGCCGATGTGGACGGGGATCCAGCCACCGTTCACGGTGGCGCAATGGCAGGAGCTCGAACACCAAGCTCTCATCTTTAAGTATCTCAAGGCTGGATTGACTGTACCCCCGGACCTCCTCGCCCCTATTCACAAGAGTCTCCAATTGATGTCGGCAAAGCTCGTCCATCACCCATCTTTGGGTTATTGTTCCTATCAGGGGAAGAAGATAGACCCAGAGCCGGGAAGGTGCCGAAGGACGGATGGGAAGAAGTGGAGGTGCTCCAGAGATGCACATCCTGACTCCAAGTACTGTGAGCGGCACATGATCCGCCGCCGCTACCGTTCAAGAAAGCCTGTGGAATCACAAGCTGCTCCTCAGTCTTCGTCCAATGTGGCATCAGACGTTGCCACTGGGAGCAGAAGTGGCTGTGGAAGCTTCCAGAGCCTGCCCTTGCATACAAATGGCACTCGTGAGAGTTTGAACCTTGGGAACAACGTATCGCAGCTGAAGATAGAGTCTCTTCCCAGTGAGATTAGCAAGAAAGAGTACAGGTTTGGACTGAATTCTGAAGCAGATGAGCACAACTTCTTACAGAAAGGATTGGGAAATGTGAGGTATCATGGGTTTGACTCTACCTCTGATGTCATGTGGTCTCACATATCTCAGATTCCCACAGACCTTGTCTCAGAATCAAGAAATAGTTCTACTATGGTTAGCAACTGCTTCCAACTGGGGACAGTGCGAGATACTGAGCCACTGAACATTGATGCTGCAAGATCCAAGCAACATGTCTTTGGTGATCAGCTAAGCCTAGCGGGGTGTTTGAAACAGGAATATCAGTCTCCTCAGACTTTCTTAACTGACTGGCTCTGGAAGAAGGATTTAAGCTCCCCGCCCGTTGAGTATAGATCCGATAAAGATTCTAACTGCAACCCAGATGTCAATGTTGATTGA 975 0.4964 MAELKEKKSEMSAPPMWTGIQPPFTVAQWQELEHQALIFKYLKAGLTVPPDLLAPIHKSLQLMSAKLVHHPSLGYCSYQGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRYRSRKPVESQAAPQSSSNVASDVATGSRSGCGSFQSLPLHTNGTRESLNLGNNVSQLKIESLPSEISKKEYRFGLNSEADEHNFLQKGLGNVRYHGFDSTSDVMWSHISQIPTDLVSESRNSSTMVSNCFQLGTVRDTEPLNIDAARSKQHVFGDQLSLAGCLKQEYQSPQTFLTDWLWKKDLSSPPVEYRSDKDSNCNPDVNVD 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0822 324 SMART QLQ_2 22 58 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi09g0822 324 MobiDBLite consensus disorder prediction 121 143 - -
Glsi09g0822 324 Pfam QLQ 23 56 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi09g0822 324 Pfam WRC 85 127 IPR014977 -
Glsi09g0822 324 PANTHER GROWTH-REGULATING FACTOR 5 13 225 IPR031137 GO:0005634|GO:0006351|GO:0032502
Glsi09g0822 324 MobiDBLite consensus disorder prediction 304 324 - -
Glsi09g0822 324 ProSiteProfiles WRC domain profile. 84 128 IPR014977 -
Glsi09g0822 324 ProSiteProfiles QLQ domain profile. 23 58 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi09g0822 324 MobiDBLite consensus disorder prediction 127 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0822 Glsi-ChrGlsi09 5646056 5648716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0822 21 127 GRF Transcription Factor Family AT3G13960 60.360 1.18e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Glsi09g0822 WRC 1.3e-19 No_clan