Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0819 ATGGCTCTGTTTCTCTCTCAAGGAAGAGAAAAGTTCGAAAAAGTAAAGATGTTTACATGCATAGCGTGTACGAAGCAAATGGGAGAGGATAGGGAAGAAGGAGGAGCCCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACGACGCAGATAAAGGATATGGCAGTGAAGTTTTCAGGTGCCTATAAGCAATGCAAACCGTGCACAGGGTCCAGTAGTTATAAGAAAGGACAGAGACCTTATCCAGATTTTGATACCATCTCAGAAGGAGTTCCGTACCCTTATATGGGAGGTGCAAGCTCAAGTTCAACCCCTGCATGGGACTTTACCACCTCTAACTACCCTGCTGCCAGATCTGACCCAAGATTTGCAGGGCCATTTGGTGGTGACCGAACCCCTGGAGGACGTGAGTCAGCTTCAGTCTGTGATGTAGTGTTAGAGAACGAGGATCAGCCCAAGGAGTGGATGGCACAGGTGGAACCAGGTGTTCACATTACATTTGTGTCTCTTCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATGTTCAATAAATGGCAAGCTCAAAAATGGTGGGGTGAGAATTATGATCGAATCATGGAGCTCTATAATGTCCAGAGATTCAATCGACAAAGTCTTAACACTCCTCCAAGATCTGAAGATGAGCAAAGAGATTCTTCTTACTCGAGACTGGGATCGGCACGAGAGAGCCCCATGGCGTCATCGTTAAACAAGGATTGGACGCCGAGGAACTACCATAAAACCGCAGGAAATAGAGGGTATTACCCGTCTGAAACTTTGGAACAAGGTGGTGGCCCCCTTTTGCATGCAGGGTCTTCTTTGGAAGCATCACGGACAACCACCTCTTCCAGAGATGAGCCTTCTATTAGCAATGCCAGTGACATGGAGACAGAATGGGTAGAGCAAGATGAACCTGGAGTTTACATTACAATCAGACAGTTAGCAGACGGCACCAGGGAACTTCGACGTGTCAGATTCAGCCGCGAAAGATTTGGGGAGGTACATGCCAAGAATTGGTGGGAGGAGAACAGAGAAAGAATACAAGCTCAATACCTTTGA 1104 0.4728 MALFLSQGREKFEKVKMFTCIACTKQMGEDREEGGARESGTPSTKEAVKSLTTQIKDMAVKFSGAYKQCKPCTGSSSYKKGQRPYPDFDTISEGVPYPYMGGASSSSTPAWDFTTSNYPAARSDPRFAGPFGGDRTPGGRESASVCDVVLENEDQPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQKWWGENYDRIMELYNVQRFNRQSLNTPPRSEDEQRDSSYSRLGSARESPMASSLNKDWTPRNYHKTAGNRGYYPSETLEQGGGPLLHAGSSLEASRTTTSSRDEPSISNASDMETEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVHAKNWWEENRERIQAQYL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0819 367 Pfam Transcription factor regulating root and shoot growth via Pin3 157 211 IPR013591 -
Glsi09g0819 367 Pfam Transcription factor regulating root and shoot growth via Pin3 311 366 IPR013591 -
Glsi09g0819 367 MobiDBLite consensus disorder prediction 220 316 - -
Glsi09g0819 367 MobiDBLite consensus disorder prediction 238 259 - -
Glsi09g0819 367 ProSiteProfiles BRX domain profile. 312 367 IPR013591 -
Glsi09g0819 367 ProSiteProfiles BRX domain profile. 157 212 IPR013591 -
Glsi09g0819 367 MobiDBLite consensus disorder prediction 288 311 - -
Glsi09g0819 367 MobiDBLite consensus disorder prediction 28 47 - -
Glsi09g0819 367 Pfam Transcription factor BRX N-terminal domain 38 72 IPR027988 -
Glsi09g0819 367 PANTHER PROTEIN BREVIS RADIX-LIKE 1 17 367 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0819 Glsi-ChrGlsi09 5619613 5624879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0819 13 367 Major Intrinsic Protein MIP AT1G31880 66.667 4.56e-167 469