Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0792 ATGTTCGGAGGCGGAGATGACGAGGCCTTGGCCCGCTTAGGCATGATAACGCCGTCCCTCCTCAATCCGGCGACGTCATCGGTGATATCCGGTGAGATATCGCCGTCGACGGCCGCTGCGCCGGTGAGGGACGAAAGGGGTCCAGCTCAGCCGCAGTGGAGCCATCAGGAGACGAGAGAGTTCATAGCGATCCGCGCGGAACTGGAGCGGGACTTTACTGCATCTAAGCGAAATAAGACACTTTGGGAGATCGTCAGCGCCAAGATGAGGGAAAGAGGCTTCAGAAGGACCCCAGAACAGTGTAAATGCAAGTGGAAAAACCTTGTTAATCGCTATAAGGGGAAAGAGACATCTGATCCAGAGCACGGGAGGCAATGTCCATTTTTTGAAGAATTACATGCAATCTTTGCTCAAAGAGCACATAACATGCAGCGGTTACTTCTTGAATCTGAGACTCGTTCAACTCAGACAAAGAAGGGGATGAAAAGACTTAGTGGAGATAGGTCCTCAGAGGAATTCTCAGAAGATGATGATGATGTCGAAGATGACAGTGAAGAGGAGAGACCTGTTAGAAGCAACTCTCGCAAAAGGAAAGCTGACAAAGTTGTAATGGAGAAGTCTTCAAGGGCAAGCAATGCGTCAAATGCTGGCAGTAATACTACCAGTAGCATTCAGGAAATGCTCAAGGAATTCTTCCAGCAGCAACTGAGGATGGAGATGCAGTTGAGGGAGATGATGGAAAGGCGTGCCCAAGAAAGGCAGCTGTTTGAGCAGGAATGGCGGCAGTCAATGGAGAAGCTTGAGAGGGAGAGATTAATGATTGAGCAAGCGTGGAGGGAGAGGGAAGAACAGAGGAGAATGAGAGAAGAGAGCCGAGCAGAGAGAAGGGATGCCTTGTTGACAACCCTTTTGAACAAACTCATCCATGAACCCAATTAG 939 0.4963 MFGGGDDEALARLGMITPSLLNPATSSVISGEISPSTAAAPVRDERGPAQPQWSHQETREFIAIRAELERDFTASKRNKTLWEIVSAKMRERGFRRTPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAIFAQRAHNMQRLLLESETRSTQTKKGMKRLSGDRSSEEFSEDDDDVEDDSEEERPVRSNSRKRKADKVVMEKSSRASNASNAGSNTTSSIQEMLKEFFQQQLRMEMQLREMMERRAQERQLFEQEWRQSMEKLERERLMIEQAWREREEQRRMREESRAERRDALLTTLLNKLIHEPN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0792 312 MobiDBLite consensus disorder prediction 186 205 - -
Glsi09g0792 312 MobiDBLite consensus disorder prediction 149 221 - -
Glsi09g0792 312 FunFam Zinc finger and SCAN domain-containing 20 53 114 - -
Glsi09g0792 312 MobiDBLite consensus disorder prediction 33 56 - -
Glsi09g0792 312 MobiDBLite consensus disorder prediction 155 170 - -
Glsi09g0792 312 PANTHER FI21293P1 46 308 - -
Glsi09g0792 312 SMART sant 49 111 IPR001005 -
Glsi09g0792 312 Coils Coil 257 277 - -
Glsi09g0792 312 ProSiteProfiles Myb-like domain profile. 53 109 IPR001005 -
Glsi09g0792 312 CDD GT1 51 116 - -
Glsi09g0792 312 Gene3D - 53 114 - -
Glsi09g0792 312 MobiDBLite consensus disorder prediction 171 185 - -
Glsi09g0792 312 Pfam Myb/SANT-like DNA-binding domain 51 135 IPR044822 -
Glsi09g0792 312 MobiDBLite consensus disorder prediction 207 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0792 Glsi-ChrGlsi09 5458643 5460206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0792 39 307 Trihelix Transcription Factor Family AT2G38250 44.322 2.20e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi09g0792 Myb_DNA-bind_4 4.4e-23 CL0123