Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0790 ATGAAGCTCTACGGTATCCGTACTGCTGTTTTTGTTTTAAATCGTAATTTCTGTCTTCTTCAGCTGTATGTACCAGTACTTCATCGAACTTTCTTGCACACCGGTGTCTTAGTTGCTCTAGTGTGTAATAAAATCTGCGTATATGATAACAGGGGAATTCTGAGTAAGTCCCTAATATTGGTGGCTATATTATGCTTACACATTGTTGCTATGGGTGTTTATCTAATGAAACGGCAATGGCCATGGCCTTGGCTTCTTTATGCTCTGCTGATATGTATTGTAATGAACAAAAATGAAGCGATCAGTCCTGATGGAGAGGCGCTTCTCAGCTTCAGAACAGCAGTTGTTAACTCAGATCGTGTCCTGTTACAATGGAGGCCTGAGGATCCTGACCCATGTAAATGGAAAGGAGTAAAGTGTGATCCAAAAACCAAGAGAGTGATACATCTGGGTCTAGATCATCAAAATTTAAGTGGGTCTATTTCACCTGACCTTGGGAAGCTAGAGCATCTGAGAGTTCTTGTTCTTAGCAACAATAACTTCTATGGGACTATTCCATCAGAATTGGGAAATTGTGCTGAGTTGCAAGGAATATATTTGCAGGGTAATTACCTTAGTGGAGTGATCCCAAGTGAAATAGGAAACCTTTCACAGCTTCAAAATTTGGATATATCAAGCAACTCCCTTAGTGAGAGTATTCCTCCATCACTTGGGAAGTTGTATAATCTAAAAAAGTTCAATGTGTCAACCAATTTCCTGGTTGGACCAATACCTTCTGATGGTGTGCTTGCTAACTTTACTGAAAGCTCCTTTGTTGGAAATCGTGGCTTGTGTGGAGTGCAAATCACTACAACATGTAATGATGATGATTCGCCTAATACCAATACTCAATCTTCAACCTCAGACCCAAATCAAAATGGAAAGAAGAAATATTCTGGCAGGTTGCTTATCAGTGCATCAGCAACTGTGGGTGCACTACTGTTAGTGGCACTTATGTGCTTCTGGGGTTGCTTTCTTTATAAGAAGTTTGGTAAACACCACAAAAAAAGCCTCGCAATAGATGTCTGTGGAGGAGCATCAATTGTGATGTTTCATGGAGATCTACCATATTCTTCAAAAGACATTATTAAGAAACTAGAGACTTTGAATGAGGAACACGAAATAGGTTGTGGGGGATTTGGAACAGTTTACAGGCTTGCAATGGATGACGGGAATGTATTTGCTTTGAAAAGGATTGTAAAGTTGAATGATGGATTTGATCGATTTTTTGAGAGAGAGCTTGAAATTCTTGGAAGCATAAAACACCGATATCTAGTGAACTTGCGAGGATATTGCAATTCACTGACATCAAAGTTGTTGATATATGATTACCTACCTGGTGGTAGCCTTGATGAAGCTCTTCATGAAAGATCTGAGCAACTAGACTGGGATTCACGCTTGAATGTTATCATGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCTAGGATTATACACCGTGACATAAAATCAAGCAATATTTTGCTTGATGGAAACTTGGATGCTCGAGTCTCTGATTTTGGACTCGCCAAACTTTTGGAGGATGAAGAATCTCACATCACTACCATTGTCGCAGGAACATTTGGTTATCTTGCCCCAGAATATATGCAAAGTGGCAGAGCAACTGAGAAGACTGATGTTTACAGTTTTGGTGTCCTGGTACTTGAAGTGTTGAGTGGAAAGCGACCAACAGATGCATCATTCATAGAAAAGGGCCTCAATATTGTCGGTTGGTTGAATTTTCTAATTACCGAAAGTAGGGCAAGAGAGATTGTTGATCTGCAATGTGAAGGGCTGCAGGTAGAGAGCCTGGATGCATTGCTCACTGTAGCCATAAAATGTGTTTCTTCAAGTCCAGAGGATCGACCCACTATGCACAGAGTGGTCCAGTTGATTGAATCGGAGGTCATAACCCCATGTCCGAGCGACTTCTATGACTCCAACTCCGAATAG 2004 0.4102 MKLYGIRTAVFVLNRNFCLLQLYVPVLHRTFLHTGVLVALVCNKICVYDNRGILSKSLILVAILCLHIVAMGVYLMKRQWPWPWLLYALLICIVMNKNEAISPDGEALLSFRTAVVNSDRVLLQWRPEDPDPCKWKGVKCDPKTKRVIHLGLDHQNLSGSISPDLGKLEHLRVLVLSNNNFYGTIPSELGNCAELQGIYLQGNYLSGVIPSEIGNLSQLQNLDISSNSLSESIPPSLGKLYNLKKFNVSTNFLVGPIPSDGVLANFTESSFVGNRGLCGVQITTTCNDDDSPNTNTQSSTSDPNQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKHHKKSLAIDVCGGASIVMFHGDLPYSSKDIIKKLETLNEEHEIGCGGFGTVYRLAMDDGNVFALKRIVKLNDGFDRFFERELEILGSIKHRYLVNLRGYCNSLTSKLLIYDYLPGGSLDEALHERSEQLDWDSRLNVIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLITESRAREIVDLQCEGLQVESLDALLTVAIKCVSSSPEDRPTMHRVVQLIESEVITPCPSDFYDSNSE 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0790 667 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 101 263 - -
Glsi09g0790 667 ProSiteProfiles Protein kinase domain profile. 382 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0790 667 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 458 660 - -
Glsi09g0790 667 Gene3D Ribonuclease Inhibitor 102 287 IPR032675 -
Glsi09g0790 667 MobiDBLite consensus disorder prediction 289 308 - -
Glsi09g0790 667 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 356 457 - -
Glsi09g0790 667 SMART LRR_typ_2 216 240 IPR003591 -
Glsi09g0790 667 SMART LRR_typ_2 168 192 IPR003591 -
Glsi09g0790 667 ProSitePatterns Protein kinases ATP-binding region signature. 388 414 IPR017441 GO:0005524
Glsi09g0790 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Glsi09g0790 667 SUPERFAMILY Protein kinase-like (PK-like) 368 649 IPR011009 -
Glsi09g0790 667 Gene3D Phosphorylase Kinase; domain 1 358 457 - -
Glsi09g0790 667 Pfam Protein kinase domain 383 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0790 667 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 152 650 - -
Glsi09g0790 667 Pfam Leucine rich repeat N-terminal domain 103 141 IPR013210 -
Glsi09g0790 667 SUPERFAMILY L domain-like 102 268 - -
Glsi09g0790 667 Gene3D Transferase(Phosphotransferase) domain 1 458 655 - -
Glsi09g0790 667 SMART serkin_6 382 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0790 Glsi-ChrGlsi09 5438973 5450331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0790 71 658 Receptor kinase-like Gene Family AT2G35620 76.020 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Glsi09g0790 Pkinase 1.1e-44 CL0016