Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0782 ATGGTAGACATTCTCGAGGACGTTGAGGCCTCAGAGCATGGAAAATTCATAGTGAAGTTCAGTAGGAAAAGTGTTGTGAAAGCTATCAATCCTTTGATTGAGCCATTTTCAGTCACTCTCTCAAATCTTGACCTTCTTTCAGGTCGTTTTCCTGTGACGTACTTGTATTTGTTTGGCAGACCAAAACTAGTTGATGACTTTGGAGCTCTTGTTGAGGCTCTTAAGAGCTCTCTAGCACAAGTACTCCATTACTACTATCCCTTTGCTGGCAGAATCGTTCAGAACCCCAAAACTAGTGAACCTGAAATCTTCTGTGACAACAGTGGTGCTCTAGTCATTGAAGCTCATGCCAATATCCCAATGAAGAAATTAGATTTCTACAATCTCAACGAGACTCTTGAGGAAAAGCTAGTCTCCATTCAACCAGACTTTCCCTTACAAATTCAGGTAACATGTTTCACTTGCGGAGGCATTTCAATAGCACTTACTTTTGACCATGCATTAGGTGATGGAAATTCCTTTGGTAAATTCATTGCCTCGTGGTCCGAAATAGCTCAAAATAAGCCATTGTCATGCATACCAGACCATACTAGACACCTTAGAGCACGTTTTCCTCCCAAATATCACCCATCCTTGGACCAAACTTTTATCAAGTACACTTTAGAAGAGATAAAGAACATGCCAATGAATCACATCTCGCTTAAGCGCCTTTATCATGTCAATGCATCAAGTATTAATATGCTGCAGAGACTTGCATTTGTTAATGGCACCAAGAGAACAAAGATTGAAGCTTTCTCTGCTTATATATGGAAGATAATGATTGAAACCATTGATCAAAGCTATGAAAAGTGCAAGATGGGTTGGTTAATAGACGGACGAGAGAGAATAGGGAAAGGTACGAATTGCATGTCAAATTACATAGGCAACGTGTTGTCTTTGGCAGTTGGGGAGGCAAGCATTGATGAATTGAAGGAAGCTTCAATATCAGAAACTGCTAAGATAGTGCATGAGGCAATTTCAAAGGTGAGCAATGAGGTTCATTTCCTGGATTTGATTGATTGGGTTGAGTGCCATAGACCTGGTTTGATGCTAGCAAAGACAGTGTTGGGTCAGGAAGGACCTGTCCTGGTTGTGTCCTCTGGCAGAAGGTTTCCAGTGAGTGAAGTTGACCTTGGGTTTGGAAGTCCCTTGCTAGGGACAGTGTACAGCTCCATTAAAAAGAGTGGAGTTGGCTACATGAACCAGAGACCGAGTGCAAGAGGCGATGGCTCATGGACTGTGTCTGCTATCTTATGGCCTGAACTGGCGGCAGCTCTTGAGGCTGACCCCATTTTCCAACCCATGTCTGCTTCTCATTTTCAACTTTAG 1368 0.4247 MVDILEDVEASEHGKFIVKFSRKSVVKAINPLIEPFSVTLSNLDLLSGRFPVTYLYLFGRPKLVDDFGALVEALKSSLAQVLHYYYPFAGRIVQNPKTSEPEIFCDNSGALVIEAHANIPMKKLDFYNLNETLEEKLVSIQPDFPLQIQVTCFTCGGISIALTFDHALGDGNSFGKFIASWSEIAQNKPLSCIPDHTRHLRARFPPKYHPSLDQTFIKYTLEEIKNMPMNHISLKRLYHVNASSINMLQRLAFVNGTKRTKIEAFSAYIWKIMIETIDQSYEKCKMGWLIDGRERIGKGTNCMSNYIGNVLSLAVGEASIDELKEASISETAKIVHEAISKVSNEVHFLDLIDWVECHRPGLMLAKTVLGQEGPVLVVSSGRRFPVSEVDLGFGSPLLGTVYSSIKKSGVGYMNQRPSARGDGSWTVSAILWPELAAALEADPIFQPMSASHFQL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0782 455 Gene3D - 17 213 IPR023213 -
Glsi09g0782 455 Pfam Transferase family 18 440 - -
Glsi09g0782 455 Gene3D - 222 441 IPR023213 -
Glsi09g0782 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 38 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0782 Glsi-ChrGlsi09 5402558 5403925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0782 41 434 Monolignol Biosynthesis Gene Families AT5G48930 25.845 8.63e-24 101