Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0779 ATGACAGGGCGCCAACGCGGCGTTTCATTACTTTTCTATTCGGCGCCAAGATTGAGCCACTCATTGATCACACCACCTACTTGGTCAATACGTCGAGCATTTTTCCCATCTTCCCATTGCTGAATGGAGAGCACAAGAATAGGGCAATGGTTTAACCTTCTAGTTTGTGCACTGCTGTTGCTGAAGGCAGAAGGCTTTTTCGTACCAATTACTTACCTCCACAATGCAGTAGCAAAAGGAGCTGTTTGTTTGGATGGAAGCCCACCAGCTTACCACTTTGATAAGGGATTTGGAGCAGGGATCAATAACTGGTTAGTACATATTGAGGGAGGAGGATGGTGCAACAATATCACTTCTTGCCTTTCCCGCAAGAACTCTCGTTTAGGCTCATCTAGGCAAATGGCCAAGCAGATTGCCTTTTCTGGATTTCTAAGTAACAAGCGACAGTTTAATCCTGATTTCTTCAACTGGAACCGAATCAAGGTCAGGTACTGTGATGGTTCATCATTTACTGGTGATGTAGCAGCAGTCAATCCAGTCACTAACTTGCACTTCAGAGGAGCAAGGGTTTTTTCTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAGAAATGCTAAAAATGCTATTCTCTCTGGCTGTTCAGCTGGAGGATTGACTTCAATATTGCACTGTGATCGCTTCCGAGCTCTATTACCTCCGGGTGCTAAAGTGAAATGCCTTTCAGATGCTGGCTATTTTATCAATGCAAAGGATGTCTCTGGAGCACAACTCATTGAACAGTTTTACAGTCAAGTTGTTGCAACTCATGGTTCAGCAAGGAATTTGCCTCAATCCTGCACTTCAAGGCTCAGCCCAGGGCTGTGCTTTTTTCCGCAATATGTGGCATCACAAATCAGGACACCGATCTTCTTTGTAAATGCAGCCTATGACTCATGGCAGATTAAGAACATTTTGGCTCCGGGTGTTGCTGATCCTCACGGCCACTGGCATAGCTGCAAACTTGATATAAACAACTGCTCCCCTGATCAACTCACTATAATGCAAGGCTTTAGGTCCCAATTCTTAAGGGCATTGAGTGTGCTGCTCAACTCTCCTTCTAAAGGAATGTTCATAGACTCTTGCTATGCTCACTGCCAAACTGAAATGCAGGAGACATGGTTAAGACGCGACTCTCCTATACTGTCCAAAACAACACTTGCGAAGGCAGTAGGAGACTGGTTCTATGAACGAAGCCATTTCCGACAGATAGATTGTGCGTACCCTTGCAACCCCACTTGTCACAATCGCGTTTTTGATCCACAAGACCACCCAGAAGTATAA 1323 0.449 MTGRQRGVSLLFYSAPRLSHSLITPPTWSIRRAFFPSSHCXMESTRIGQWFNLLVCALLLLKAEGFFVPITYLHNAVAKGAVCLDGSPPAYHFDKGFGAGINNWLVHIEGGGWCNNITSCLSRKNSRLGSSRQMAKQIAFSGFLSNKRQFNPDFFNWNRIKVRYCDGSSFTGDVAAVNPVTNLHFRGARVFSAVIEDLLAKGMRNAKNAILSGCSAGGLTSILHCDRFRALLPPGAKVKCLSDAGYFINAKDVSGAQLIEQFYSQVVATHGSARNLPQSCTSRLSPGLCFFPQYVASQIRTPIFFVNAAYDSWQIKNILAPGVADPHGHWHSCKLDINNCSPDQLTIMQGFRSQFLRALSVLLNSPSKGMFIDSCYAHCQTEMQETWLRRDSPILSKTTLAKAVGDWFYERSHFRQIDCAYPCNPTCHNRVFDPQDHPEV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0779 440 PANTHER NOTUM-RELATED 54 429 IPR004963 GO:0016787
Glsi09g0779 440 Pfam Pectinacetylesterase 62 413 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0779 Glsi-ChrGlsi09 5381898 5386315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0779 46 440 Carbohydrate Esterase AT4G19420 61.860 0.0 585