Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0777 ATGAATAGCATCAACGACGACAGTTCCAGACAAGATCTGGACCCTCAAAGTGACCCCAGTTCAGACTATTTAGCTCACTCTCACCCCCACCCTCTTCCTCTTCAGCCTCAGACCCAGCCTCGCCGTCCTCGTGGCTTCGCAGCCACGGCGGCGGCTACAGCCGCTGTCTCGGGCTCCAATTCTACCGGAAAGGGCAAGAAAGAGAGAGAAAAAGAGAAGGAGCGCACCAAGCTCCGAGAGCGCCACCGTCGAGCAATTACCAGCCGTATGCTCGCCGGCCTCCGTCAGTATGGTAATTTCCCTCTTCCGGCACGTGCGGACATGAATGATGTGCTCGCCGCACTCGCACGCGAGGCTGGTTGGGTTGTGGAGACAGATGGCACCACCTACAGGCAGTGCCCGCCTCCTCCTCAAATGGCATCATTTGCTGCAAGATCAGTTGAAAGTCCACTCTCTGCAGGTTCATTGAGAACTTGCTCTGTTAAAGATACACTAGAGAATCAGACACCAGTTCTTAGAATTGATGAAAGCTTGTCACCTGCATCAATTGATTCTGTTGTGATTGCAGAAAGGGACTCAAAGAATGAGAAATATGCAAGTACAAGCCCCACCAATCCAGTTGACTGCTTGGAGGCTGATCAGCTTATGCAAGATATTCATTCTGGGGCGCATGTGAATGATTTTAGGGGAACGCCTTTTGTTCCTGTTTATATAAAACTTCCAGCTGTTATTATTAACAAATTTTGCCAGTTAATTGATCCTGGAGGAGTTAGACAGGAGCTAATTCATATAAAGTCTTTAAACATTGATGGTGTCATTGTGGATTGTTGGTGGGGCATTGTTGAAGGTTGGAGCCCACAGAAATACGTGTGGTCTGGCTATAGGGAACTCTTTAACATTATTAGAGAAATCAATCTGAAATTGCAGGTCGTTATGGCTTTTCATGAATGTGGAGGGAATGATTCTAGTGACGCATTGATTGCCCTACCAAATTGGGTTTTGGAGATTGGAAAAGACAACCAGGATATATATTTCACAGATCGTGAAGGACGGAGGAATACTGAATGTCTTTCTTGGGGCATTGACAAAGAGAGAGTTCTGAAAGGAAGAACTGGAATTGAGGTCTATTTTGATTTCATGAGAAGTTTTCGGACAGAGTTTGATGACTTGTTTGCAGAAGGTCTAATTTCTGCTATAGAAATTGGACTTGGAGCATCTGGGGAGCTGAAATATCCTTCTTTTTCGGAAAGGATGGGGTGGAGGTATCCTGGTATTGGTGAGTTTCAGTGCTATGATAAATATCTGCTACAAAGTCTACGCAGAGCAGCTAAATTACGTGGTCACTCTTTTTGGGCAAGAGGACCTGATAATGCTGGTCAGTACAATTCTATGCCTCATGAAACTGGATTCTTTTGTGAACGAGGTGATTATGACAACTATTATGGACGCTTCTTCTTGCATTGGTATGCCCAGTCATTAATAGACCATGCGGATAATGTTTTGTCTCTTGCAAGCCTTGCTTTTGAGGAAACACAAATAATTGTCAAGGTTCCTACGGTATACTGGTGGTACAAGACTGCTAGTCATGCAGCAGAGCTGACAGCAGGATATCACAACCCAACAAACCAGAATGGATACTCTCCTGTTTTTGAGGTTCTGAAAAAACATCGTGTGACCATGAAGTTTGTCTGCTTAGGATTTCAGCTTTCTAGTCAGGAAGCTGATGAATCATTGGCTGACCCAGAGGCTTTGAGTTGGCAGGTATTAAACTCAGCTTGGGATCGAGGGTTGATAGTAGCTGGAGAGAATGCACTACCATGTTATGATAGAGAAGGGTACAGGAGACTAATTGAGTTAGCAAAGCCAAGAAATGATCCTGATCGCCGTCACTTTTCATTCTTCGCATATCAACAACCTTCCTGGATTCAGGGGAATATTTGCGTGTCAGAGTTGGATTCCTTTATCAAATGCATGCATGGTGAGATGGCGGGAGATCTGCAATGA 2004 0.4506 MNSINDDSSRQDLDPQSDPSSDYLAHSHPHPLPLQPQTQPRRPRGFAATAAATAAVSGSNSTGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVETDGTTYRQCPPPPQMASFAARSVESPLSAGSLRTCSVKDTLENQTPVLRIDESLSPASIDSVVIAERDSKNEKYASTSPTNPVDCLEADQLMQDIHSGAHVNDFRGTPFVPVYIKLPAVIINKFCQLIDPGGVRQELIHIKSLNIDGVIVDCWWGIVEGWSPQKYVWSGYRELFNIIREINLKLQVVMAFHECGGNDSSDALIALPNWVLEIGKDNQDIYFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDFMRSFRTEFDDLFAEGLISAIEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLLQSLRRAAKLRGHSFWARGPDNAGQYNSMPHETGFFCERGDYDNYYGRFFLHWYAQSLIDHADNVLSLASLAFEETQIIVKVPTVYWWYKTASHAAELTAGYHNPTNQNGYSPVFEVLKKHRVTMKFVCLGFQLSSQEADESLADPEALSWQVLNSAWDRGLIVAGENALPCYDREGYRRLIELAKPRNDPDRRHFSFFAYQQPSWIQGNICVSELDSFIKCMHGEMAGDLQ 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0777 667 SUPERFAMILY (Trans)glycosidases 229 661 IPR017853 -
Glsi09g0777 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 546 569 IPR001554 GO:0000272|GO:0016161
Glsi09g0777 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 584 606 IPR001554 GO:0000272|GO:0016161
Glsi09g0777 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 404 426 IPR001554 GO:0000272|GO:0016161
Glsi09g0777 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 511 527 IPR001554 GO:0000272|GO:0016161
Glsi09g0777 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 268 282 IPR001554 GO:0000272|GO:0016161
Glsi09g0777 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 528 539 IPR001554 GO:0000272|GO:0016161
Glsi09g0777 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 289 307 IPR001554 GO:0000272|GO:0016161
Glsi09g0777 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 311 332 IPR001554 GO:0000272|GO:0016161
Glsi09g0777 667 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 477 496 IPR001554 GO:0000272|GO:0016161
Glsi09g0777 667 MobiDBLite consensus disorder prediction 1 80 - -
Glsi09g0777 667 MobiDBLite consensus disorder prediction 1 23 - -
Glsi09g0777 667 Gene3D Glycosidases 224 666 - -
Glsi09g0777 667 Pfam Glycosyl hydrolase family 14 255 634 IPR001554 GO:0000272|GO:0016161
Glsi09g0777 667 Pfam BES1/BZR1 plant transcription factor, N-terminal 63 203 IPR008540 -
Glsi09g0777 667 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 168 661 IPR001554 GO:0000272|GO:0016161
Glsi09g0777 667 MobiDBLite consensus disorder prediction 63 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0777 Glsi-ChrGlsi09 5361540 5368887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0777 14 662 Glycoside Hydrolase AT5G45300 64.889 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Glsi09g0777 Glyco_hydro_14 6.4e-88 CL0058