Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0761 ATGCCACAAAACTGCATAGCCCCAAAACCAGAATACTGCACTAGTCAGCCTGTTGAAGGACCTCCAGAGATGACTACTCCCCATAACTCCACTGTCCTCACCTACCCCACACAAACCAATGAACAATCTTCAACAAAGCTCACTTGGTACCCCATAACTTTGAAGTTTGAGGAGTTGGTGTACAAAGTTAAACTAGAGCAGAAAGGACTGTTTTGGGGAAGTACATGGACTACCAGAGAGAAGACCATATTGAATGGGATTTCAGGTATGGTTTGCCCAGGAGAAATACTGGCTATGCTGGGCCCATCTGGTAGTGGCAAAACCACTCTTCTTACAGCTCTTGGTGGTCGTTTAAATGGTAAATTATCTGGAAAGATCACATACAACGGTCAGCCTTTCTCAGGTGCCATAAAACGAAGAACAGGTTTTGTGGCTCAGGATGATGTTCTCTACCCCCACCTGACTGTTTCTGAAACTCTAGTCTTCACTGCACTTCTAAGGCTGCCCAATAGCTTGACCCGGGATGAGAAAGTTCAGCATGTAGAGAGAGTCATCTCTGAACTAGGACTGACTCGGTGCAGTAACAGCATGATAGGAGGCCCACTGTTCAGAGGAATATCAGGTGGGGAGAAAAAGAGGGTGAGTATAGGTCAGGAAATGCTCATCAATCCAAGTCTCCTGTTGCTAGATGAGCCCACTTCTGGTTTGGACTCCACCACGGCTCAAAGGATCTTGAACACAATCAAACGCCTGGCTAGTGGGGGTAGAACTGTCGTCACCACCATTCATCAACCCTCTAGCCGTCTCTACCATATGTTCGATAAGGTGGTCTTGCTCTCTGAAGGGCGGCCCATATATAATGGCCCTGCTTCAACAGCCATGGACTACTTTTTATCAATTGGTTTCTCCACACCCATCACTGTCAATCCGGCTGATTTCTTGCTTGATCTTGCCAATGGGATTGCCCCGGACTCCAAGCATGCAGCTGAACAAAGCGAGAACCAGGAAGAAGAAAGGAAGCTGGTCAGAGAAACTCTCATCTCTGCATATGAGAAGAACATAGTTTCAAAGTTGAAAGATGAGCTTTCCAACTTGGAGATGAGCAACTACAACGTCACGAAAGATGTTTCTGCTAGAAATGACATAAAACCAGAGCAATGGTGCACAAGCTGGTGGTATCAATTCAAGGTACTGTTACAGAGGGGGCTGAGAGAACGAAGGTATGAAGCCTTCAACAGGTTGAGAATATTCCAAGTCATAAGTGTTGCTTTTCTTGGTGGACTCTTGTGGTGGCATACACCAGAATCACACATTGAAGACCGGATCGCGTTGCTCTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCTGTCTTCACATTTCCTCAAGAAAGAAGAATGCTGATCAAGGAACGGTCATCAGGAATGTACCGTCTCTCTTCCTACTTTCTAGCTAGAACAATAGGAGACTTGCCACTGGAACTTGCACTTCCAACTGCATTTGTCTTCATTATCTATTGGATGGGAGGGCTTAAACCTCATCCTGTGACTTTCATCCTTTCCCTTCTTGTGGTCCTTTACAGTGTTCTTGTCTCTCAAAGCCTTGGTTTAGCATTTGGTGCTATTCTGATGGAGATTAAACAGGCCACTACTTTAGCTTCTGTCACAACCCTTGTATTTCTCATTGCTGGAGGATACTATATTCAACAGATTCCTCCCTTCATAGTGTGGCTCAAGTACTTAAGCTACAGCTACTACTGCTACAAGCTTCTTCTGGGTGTTCAATACAATGAAGGTGATTACTACGAGTGCTCAAAGGGGATTTTGTGCAGGGTTGCAGATTTCCCTCCCATCAGATCAATGGGTTTGAATCATTTGTGGGTTGATATGTCCATTATGGCTCTGATGTTGGTGGGTTATAGGCTAGTTGCTTATTTAGCGCTACATAGAGTGAGGTAG 1968 0.4512 MPQNCIAPKPEYCTSQPVEGPPEMTTPHNSTVLTYPTQTNEQSSTKLTWYPITLKFEELVYKVKLEQKGLFWGSTWTTREKTILNGISGMVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLSGKITYNGQPFSGAIKRRTGFVAQDDVLYPHLTVSETLVFTALLRLPNSLTRDEKVQHVERVISELGLTRCSNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLASGGRTVVTTIHQPSSRLYHMFDKVVLLSEGRPIYNGPASTAMDYFLSIGFSTPITVNPADFLLDLANGIAPDSKHAAEQSENQEEERKLVRETLISAYEKNIVSKLKDELSNLEMSNYNVTKDVSARNDIKPEQWCTSWWYQFKVLLQRGLRERRYEAFNRLRIFQVISVAFLGGLLWWHTPESHIEDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPHPVTFILSLLVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYCYKLLLGVQYNEGDYYECSKGILCRVADFPPIRSMGLNHLWVDMSIMALMLVGYRLVAYLALHRVR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0761 655 Pfam ABC-2 type transporter 263 328 IPR043926 GO:0140359
Glsi09g0761 655 Pfam ABC transporter 84 234 IPR003439 GO:0005524
Glsi09g0761 655 CDD ABCG_EPDR 51 288 - -
Glsi09g0761 655 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 54 306 IPR003439 GO:0005524
Glsi09g0761 655 Pfam ABC-2 type transporter 393 599 IPR013525 GO:0016020|GO:0140359
Glsi09g0761 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 297 IPR027417 -
Glsi09g0761 655 ProSitePatterns ABC transporters family signature. 206 220 IPR017871 GO:0005524|GO:0016887
Glsi09g0761 655 Gene3D - 73 298 IPR027417 -
Glsi09g0761 655 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 38 648 - -
Glsi09g0761 655 SMART AAA_5 93 283 IPR003593 GO:0016887
Glsi09g0761 655 FunFam ABC transporter G family member 22 72 300 - -
Glsi09g0761 655 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0761 Glsi-ChrGlsi09 5212012 5214998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0761 94 291 Calmodulin-binding Proteins AT2G36910 25.366 1.05e-10 63.2