Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0753 ATGACCATTGATGTACCGTCATCCATGGCCCAAAGTGTGAGAACAAACAGGCCTTCCTTTAGCTCTAGTAATGGCAATGACGATACTCCTGTGCACAACCTTGCTGCTGTTAGCAATGGCGATGACTATGACAGTGATAGCTCTAATTTCGCACCACCCACACCAACAACTCTATCAATGGCTATTCCAGCAGACCTCGCTGGAGCTGTACCCTTGATAGATAGATTCCAGGTGGATGGATTTTTAAGATTAATGCAGAAACAAATTCATTCTGCTGGAAAACGTGGATTTTTTTCTAAAAGATCTGTAGGCCCTCAAGTTCGAGAGAAGTTTACATTTGAGGATATGCTGTGTTTCCAAAAGGATCCTATACCAACATCATTGCTTAAGATTAACAGTGATTTGGTAAGCCGGGCAACAAAGCTATTTCAGATAATTTTGAAATATATGGGAGTAGATTCATCGGATCGTGTGACTCCAATAAGCTTAGATGAACGAGTTGAGCTTGTCGGGAAACTATACAAGCAAAGTTTGAAGCGTTCGGAACTCCGAGATGAGCTTTTTGTTCAGATATCAAAACAAACAAGAAATAACCCTGAAAGGCAATACTTGATTAAAGCATGGGAGCTGATGTATTTATGCGCCTCATCCATGCCACCTAGTAAAGACATTGGAGGATATCTATCTGAATATGTTCATAACGTAGCACATAATGTGACTACTGATTCTGAAATCCGAGCCCTTGCACTAAATACATTAAATGCTTTGAAGCGTTCTGTCAAGGCTGGTCCCAGGCATATAATGCCAGGGCGTGAGGAGATTGAAGCTCTGCTAACTGGGAGAAAGCTTACCACTATAGTGTTTTTCCTGGATGAAACTTTTGAAGAAATTACTTATGACATGGCAACAACAGTTGCTGATGCTGTTGAGGAACTTGCAGCGATCATTAAACTGTCAACATACACTAGCTTTACTCTGTTTGAATGCCGTAAAGTTGTTACTGGCTCCAAATCACCTGATTCTGGAAATGAGGAGTACATTGGGTTAGATGATAATAAATATATTGGGGACCTCCTGGCTGAATTTAAGGCAGCAAAAGATCGAAGTAAGGGAGAAATCTTGCACTGTAAACTGATATTTAAGAAAAGACTATTTCGGGAGTCAGATGAAGCTGTGGCAGATCCAATGTTTGTGCAATTATCCTACGTACAATTACAGCATGATTATATTTTGGGTAATTATCCTGTTGGAAGGGATGATGCTGCGCAACTATCTGCACTGCAAATCTTGGCTGAGATTGGATTTGTCAGAGCACCTGAATCATGCACCGACTGGGATTCACTGTTGGAGAGGTTCCTACCTAGACAGATTGCAATCACACGAGCAAAACGGGAATGGGAGCTGGACATCCTTTCTCGCTATCATTCATTGGAGCATTTGACAAAAGATGAGGCAAGACAACAATTCCTGCGTATATTGAGGGCACTTCCTTATGGGAATTCAGTTTTCTTCCATGTTCGCAAGATTGATGATCCTATTGGACTTCTGCCTGGACGAATAATCTTGGGCATCAACAAGAGAGGGGTTCATTTCTTCCGTCCAGTTCCAAAGGAATATCTGCACTCAGCTGAGTTAAGAGACATAATGCAATTCGGAAGTAGCAACACTGCGGTATTTTTCAAGATGCGCGTTGCAGGTGTTCTTCACATATTCCAGTTCGAAACCAAACAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACATATAAATGATGTGATGTTGCGCCGCTATTCCAAAGCACGATCTGTTGCTGGGGGGGCTGTGAACGGAGATATTGGTAATGTTAGCAATTTTAAGAGTTCTAATTTGGAAATATATGAGAGGCGTGTTCAAGATTTATCAAAAGCTGTTGAAGAATCTCAAAGAAATGCTGATCAATTGCTGGAAGAATTGCTTGAAAAGAGAAAGCAAGAAGAGAAAATGCAAAAAGAATTGGAGGGCTTGAAAGAATCCTTAACTGCTGAGAAGCAAAATTTTGAGGAAGTTACGTGTGATCATGATAGGCTTAGGTCAATATGCAATGAAAAAGATATGGCACTTCAGGCTGCAATTCAAGAGAAAAGGAATATGGAAACAAGATTGGCTAAGTTGAGTAATATGATGATAGAGAACACCAAAAAGGACCCTGTTGGAGCAAATAACCAAGACTTGCATAAGCTTGAAGATGAGCTAAAACTTCGTAAAGATGAGCTGCTTGCAGCAGAAGAAACTATCAAAAGATTGACATATGAAAAATTGGTTCTGGATCGGAAGCTATCAGAGCTGGAGAAGAGAAATGCTGATGAGATTAATGTTCTTGAACGGAGGTTTGAGCAAGAACGCAAAACCCTGAAATCTCAAGTGTATGACCTTGAGAAGAAGTTTGAAGGATTTAGACAAGAATTAGTTGCTGCTGAATCTACTCTTTCAGTCAAAGACTCTGAGTTGGCTGCATTGCAGAATAATTTAAGGGAACTGGAGGAACTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAAACAGCTGCCATATTAAGGATGCAAGCGACTCAGTTAGCTGAAATGGAAGTGCTTTATAAAGAAGAGCAGGTTCTAAGGAAGCGTTATTTTAACACAATTGAAGATATGAAAGGCAAGATCAGAGTTTACTGTCGTCGAAGACCTCTTAGTGAAAAAGAGATTGCTGAGAAAGAAAGAGATATTCTTACTAGTGCAGATGAGTTTACAGTTGAACATCCTTGGAAAGATGATAAACCAAAGCAGCATGTATATGATCGTGTGTTCGATAGTGATGCTACCCAAGAAGATGTTTTTGAGGACACAAGGTATCTGGTGCAGTCTGCTGTTGATGGTTATAATGTCTGCATATTTGCTTATGGTCAAACTGGTTCTGGAAAAACATTTACAATCTATGGATCTGAAAACAACCCTGGGCTTACCCCACGTGCTACTGCAGAACTTTTTAAAATTTTAAGGAGAGATAGTAACAAGTTTTCTTTTTCCTTAAAGGCATACATGGTGGAACTATATCAAGATACACTTGTAGATCTTCTGTTACCAAAGAATGTAAAGCGTTTAAAATTAGATATCAAGAAGGATTCAAAGGGCATGGTAGTTGTGGAAAATGTAACAGTTGTGCCAATTTCCACTATGGAGGAATTGAATTACATAATACAAAGAGGATCTGAACGACGACATACATCTGGAACACAAATGAATGAAGAAAGCTCAAGATCTCATCTTATATTGTCAATTGTAATTGAAAGTACCAACCTTCAAAGTCAATCTGTTGCAAGAGGAAAGCTAAGTTTTGTGGATCTTGCTGGTTCAGAAAGAGTGAAGAAGTCAGGGTCCACAGGTAGTCAACTTAAAGAAGCTCAAAGCATTAATAAATCATTATCAGCACTTGGGGATGTTATCAGTGCTTTGTCTTCTGGTGGTCAACACATACCTTATAGGAATCACAAGTTAACTATGCTAATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTTATGTTTGTGAATGTATCTCCAGCACAATCAAACTTGGACGAGACACACAATTCTCTTATGTATGCATCGCGAGTGAGATCAATTGTGAATGATCCTAGCAAAGATGTTTCCTCAAAAGAGGTAGCTCGGTTGAAGAAGTTGGTTGCATATTGGAAGGAGCAAGCAGGTAGAAGGGGTGAGGATGAGGATTTAGAAGAAATTCAAGAGGAAAGGCCAACTAAAGAGAAGACAGATGGCCGGCATTCTATGTAG 3813 0.3978 MTIDVPSSMAQSVRTNRPSFSSSNGNDDTPVHNLAAVSNGDDYDSDSSNFAPPTPTTLSMAIPADLAGAVPLIDRFQVDGFLRLMQKQIHSAGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKINSDLVSRATKLFQIILKYMGVDSSDRVTPISLDERVELVGKLYKQSLKRSELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMPPSKDIGGYLSEYVHNVAHNVTTDSEIRALALNTLNALKRSVKAGPRHIMPGREEIEALLTGRKLTTIVFFLDETFEEITYDMATTVADAVEELAAIIKLSTYTSFTLFECRKVVTGSKSPDSGNEEYIGLDDNKYIGDLLAEFKAAKDRSKGEILHCKLIFKKRLFRESDEAVADPMFVQLSYVQLQHDYILGNYPVGRDDAAQLSALQILAEIGFVRAPESCTDWDSLLERFLPRQIAITRAKREWELDILSRYHSLEHLTKDEARQQFLRILRALPYGNSVFFHVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSVAGGAVNGDIGNVSNFKSSNLEIYERRVQDLSKAVEESQRNADQLLEELLEKRKQEEKMQKELEGLKESLTAEKQNFEEVTCDHDRLRSICNEKDMALQAAIQEKRNMETRLAKLSNMMIENTKKDPVGANNQDLHKLEDELKLRKDELLAAEETIKRLTYEKLVLDRKLSELEKRNADEINVLERRFEQERKTLKSQVYDLEKKFEGFRQELVAAESTLSVKDSELAALQNNLRELEELREMKEDIDRKNEQTAAILRMQATQLAEMEVLYKEEQVLRKRYFNTIEDMKGKIRVYCRRRPLSEKEIAEKERDILTSADEFTVEHPWKDDKPKQHVYDRVFDSDATQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATAELFKILRRDSNKFSFSLKAYMVELYQDTLVDLLLPKNVKRLKLDIKKDSKGMVVVENVTVVPISTMEELNYIIQRGSERRHTSGTQMNEESSRSHLILSIVIESTNLQSQSVARGKLSFVDLAGSERVKKSGSTGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAQSNLDETHNSLMYASRVRSIVNDPSKDVSSKEVARLKKLVAYWKEQAGRRGEDEDLEEIQEERPTKEKTDGRHSM 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0753 1270 SMART B41_5 279 503 IPR019749 -
Glsi09g0753 1270 Coils Coil 700 720 - -
Glsi09g0753 1270 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Glsi09g0753 1270 Pfam FERM central domain 389 503 IPR019748 -
Glsi09g0753 1270 Gene3D - 395 496 IPR014352 -
Glsi09g0753 1270 Coils Coil 623 682 - -
Glsi09g0753 1270 MobiDBLite consensus disorder prediction 1241 1270 - -
Glsi09g0753 1270 Gene3D - 1218 1266 - -
Glsi09g0753 1270 ProSitePatterns Kinesin motor domain signature. 1115 1126 IPR019821 GO:0003777|GO:0005524|GO:0007018
Glsi09g0753 1270 Gene3D - 501 608 IPR011993 -
Glsi09g0753 1270 FunFam Kinesin-like calmodulin binding protein 386 497 - -
Glsi09g0753 1270 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 501 610 - -
Glsi09g0753 1270 PANTHER MYOSIN VII, XV 6 900 - -
Glsi09g0753 1270 MobiDBLite consensus disorder prediction 1 33 - -
Glsi09g0753 1270 ProSiteProfiles FERM domain profile. 283 597 IPR000299 GO:0005856
Glsi09g0753 1270 Coils Coil 787 807 - -
Glsi09g0753 1270 SUPERFAMILY Second domain of FERM 381 498 IPR035963 -
Glsi09g0753 1270 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 282 385 - -
Glsi09g0753 1270 CDD KISc_C_terminal 892 1217 - -
Glsi09g0753 1270 SMART kinesin_4 892 1223 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi09g0753 1270 MobiDBLite consensus disorder prediction 1 52 - -
Glsi09g0753 1270 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Glsi09g0753 1270 Pfam Kinesin motor domain 900 1215 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi09g0753 1270 FunFam Kinesin-like calmodulin-binding protein 838 1217 - -
Glsi09g0753 1270 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 98 280 - -
Glsi09g0753 1270 SUPERFAMILY Prismane protein-like 837 898 IPR011254 GO:0003824|GO:0016491
Glsi09g0753 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 894 1243 IPR027417 -
Glsi09g0753 1270 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Glsi09g0753 1270 SUPERFAMILY PH domain-like 503 591 - -
Glsi09g0753 1270 PRINTS Kinesin heavy chain signature 966 987 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi09g0753 1270 PRINTS Kinesin heavy chain signature 1085 1102 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi09g0753 1270 PRINTS Kinesin heavy chain signature 1165 1186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi09g0753 1270 PRINTS Kinesin heavy chain signature 1116 1134 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi09g0753 1270 ProSiteProfiles Kinesin motor domain profile. 894 1215 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi09g0753 1270 Coils Coil 737 778 - -
Glsi09g0753 1270 Gene3D Kinesin motor domain 881 1217 IPR036961 -
Glsi09g0753 1270 CDD FERM_C_KCBP 500 607 - -
Glsi09g0753 1270 Gene3D - 282 386 - -
Glsi09g0753 1270 Coils Coil 822 859 - -
Glsi09g0753 1270 CDD FERM_B-lobe 398 496 IPR019748 -
Glsi09g0753 1270 Gene3D MyTH4 domain 98 280 IPR038185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0753 Glsi-ChrGlsi09 5151802 5160470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0753 39 1265 Calmodulin-binding Proteins AT5G65930 75.263 0.0 1898
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0946 05 59568816 59585918 Glsi09g0753 09 5151802 5160470 CCT