Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0751 ATGCTTTCCCTCCAATACGGCAGTCGCCGCCGCCGCCAAAAGCATGATATGGGTCCGCGGCAACGGCCTGGGCTCTCCCTCTCCCTCACCTCCACCATCATCTGCATTTTGCAGCTGCTCTTCCCTGCGGCGATCTCTCAAGCCCAGATTCTGAAAACGACGCAGTACGTTTTTGGCCCATTTAATTTCTCCTATTATAACACCTTTGATGTTATGGCTCCAGCGTCAATCAACTTTGGAGCTCTTCAAGTAACTCCCGACACCGCCGGCCACGTAGACCTTACAGAAACCTCCGGCCGAATAATTTACCGGCAACCTTTCAAACTTTGGGAAGATAACGGAAAAGTCGCTTCCTTTAACACTTCCTTCCTCGTTAACGTCTTTCGAGTTAACAACGCTACTCCTGGTGAAGGCGTCGCCTTCATGATTGCCCCAGCTCTCGAGCTTCCTCAAAATAGTCATGGTCAGTATCTGGGTCTCACCAACTCCACCAACGACGGCAACTCCACCAATCAAATCGTGGCAATCGAATTGGATACTGTCAAGCAGGATTTCGACCCAGATGATAATCATATTGGGCTTGACATCAACAGCGTTCGCTCGATAAAAAATGTTTCCCTGTCTCAGTTTGGTATCCAGATCGCCCCCAATGGTAACAAATACTACGTGCTCTGGATAGAATACAATGGCGCACGCAAGGTGATCGACGTATACATGAAAGAGCAACCTGACAAGGATGCCCCCATAGTGGCAAAGCCCACGAAGCCTGTGCTAAGCGCTGATCTTGACCTCAAAAGATTCGTGAAACAGAGTTCCTACTTTGGGTTCGCTGCTTCCACGGGAATCACTGCTGAGCTGCATTGTGTTCTGAGATGGAATATTACGGTCGAGGATCTAATTGAAAAGGATAAAGCTGCCCGCGTTATGAAGATCCGTTGGGGTATTGGGGTGCCTCTGTTTGTTCTGGTTCTAGTGGGTATTGCTGGGTTGTTCTATTATCTACACAGGAAGAAACGGGCAAGTGGTGATTCAGACGAACAAATACTGGGCACGCTCAAGAGCCTGCCAGGTACTCCCAGAGAGTTCCCGTTCAAGGACCTGAAGAAGGCGACCAACAATTTCGATCACAAGCACAAGCTGGGCGAAGGTGGTTATGGAGTAGTTTACAGAGGAACTCTAGCAAAGGAAAACTTGGAAGTGGCCGTCAAGAAATTCTCCAGGGACCACATGAAAAGCAAAGATGACTTCTTGGCTGAGCTCACCATCATCAATCGTCTCCGTCACAAACATCTCGTTCGGTTACTCGGTTGGTGCCACAAAAACGGAGTATTGCTCTTGGTGTACGAGTACATGCCCAATGGCAGCTTGGACAACCACATTTTCTGTGAGGCAGGGACAAGTACAACCCCCTTAAGTTGGCATCTAAGGTACAAAATCATAACAGGAGTGGCTTCTGCATTGAATTACCTCCACAACGAGTATGATCAAAAAGTGGTGCACAGAGATCTCAAGGCCAGCAACATCATGTTGGACTCTAACTTCAATTCTCGTCTAGGTGACTTCGGTTTGGCTCGTGCTCTGGAGAATGAGAAAACCTCCTACGCAGAGCTAGAGGGAGTGCATGGCACCATGGGTTACATTGCCCCCGAGTGCTTCCACACCGCCAAGGCCACCCGCCAGTCAGATGTTTATGGTTTTGGGGCTGTCTTGCTTGAGGTAGTGTGTGGTCAGAGGCCATGGACAAAGAATGAGGGCTATCAGAGTCTCGTGGACTGGGTTTGGTACTTGTTTTGTGAAGGGAGGGTGCTAGAGGCAGTGGACCAGAGGTTGGGGAGCGACTACGTGGCTGAGGAGGCAGAGAGGATTTTAACATTAGGACTAGCTTGCTCTCATCCTATTGCCAGTGAGAGGCCTAAAATGCAAATGATTGTGCAGATTATATCTGGGTCAGTACCTGTGCCCCATGTCCCATCATTCAAGCCATCTTTTGTGTGGCCATCAGAAGAATTAGGGAGCTTTGCTAGTGACTTCACAAGAGGATCCATCACTCAAGGCACACCCATAAACACACTATAA 2076 0.4899 MLSLQYGSRRRRQKHDMGPRQRPGLSLSLTSTIICILQLLFPAAISQAQILKTTQYVFGPFNFSYYNTFDVMAPASINFGALQVTPDTAGHVDLTETSGRIIYRQPFKLWEDNGKVASFNTSFLVNVFRVNNATPGEGVAFMIAPALELPQNSHGQYLGLTNSTNDGNSTNQIVAIELDTVKQDFDPDDNHIGLDINSVRSIKNVSLSQFGIQIAPNGNKYYVLWIEYNGARKVIDVYMKEQPDKDAPIVAKPTKPVLSADLDLKRFVKQSSYFGFAASTGITAELHCVLRWNITVEDLIEKDKAARVMKIRWGIGVPLFVLVLVGIAGLFYYLHRKKRASGDSDEQILGTLKSLPGTPREFPFKDLKKATNNFDHKHKLGEGGYGVVYRGTLAKENLEVAVKKFSRDHMKSKDDFLAELTIINRLRHKHLVRLLGWCHKNGVLLLVYEYMPNGSLDNHIFCEAGTSTTPLSWHLRYKIITGVASALNYLHNEYDQKVVHRDLKASNIMLDSNFNSRLGDFGLARALENEKTSYAELEGVHGTMGYIAPECFHTAKATRQSDVYGFGAVLLEVVCGQRPWTKNEGYQSLVDWVWYLFCEGRVLEAVDQRLGSDYVAEEAERILTLGLACSHPIASERPKMQMIVQIISGSVPVPHVPSFKPSFVWPSEELGSFASDFTRGSITQGTPINTL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0751 691 ProSiteProfiles Protein kinase domain profile. 374 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0751 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Glsi09g0751 691 PANTHER - 84 652 - -
Glsi09g0751 691 ProSitePatterns Protein kinases ATP-binding region signature. 380 404 IPR017441 GO:0005524
Glsi09g0751 691 MobiDBLite consensus disorder prediction 1 23 - -
Glsi09g0751 691 FunFam probable L-type lectin-domain containing receptor kinase S.5 359 450 - -
Glsi09g0751 691 CDD lectin_legume_LecRK_Arcelin_ConA 61 293 IPR001220 GO:0030246
Glsi09g0751 691 FunFam probable L-type lectin-domain containing receptor kinase S.5 451 652 - -
Glsi09g0751 691 Pfam Legume lectin domain 61 301 IPR001220 GO:0030246
Glsi09g0751 691 Pfam Protein kinase domain 375 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0751 691 Gene3D Phosphorylase Kinase; domain 1 359 450 - -
Glsi09g0751 691 SUPERFAMILY Protein kinase-like (PK-like) 356 669 IPR011009 -
Glsi09g0751 691 CDD STKc_IRAK 380 647 - -
Glsi09g0751 691 Gene3D - 53 310 - -
Glsi09g0751 691 Gene3D Transferase(Phosphotransferase) domain 1 451 651 - -
Glsi09g0751 691 SMART serkin_6 374 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0751 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 296 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0751 Glsi-ChrGlsi09 5144750 5147633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0751 97 663 Receptor kinase-like Gene Family AT5G55830 38.972 2.80e-127 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi09g0751 Pkinase 1.7e-50 CL0016