Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0731 ATGGTTTCGACGGCTTCTGGCGCCGCTTCCCCGCCGGCGTGTAATTGCTGTTGTAACTTGATTTTTCTGGAGTGTGGTTTTGATGAATCGAAGTCAGAGAGCTCCCACGTCTTGCTCGGGGATTACATGGAGGATGACTTCAAAGTCTTACTCTTATCTGCACCACGCCGATCTATTCTCTCTCTTCCGCATAAGCGTAGTACGAGCGTAGTTGCTGCCTTAGATGGGACAATACACTTGGTTGAGAATGGTTCTATGAGGGTAATATGGTCGTTTCCAACAGGATCGCCAATTTACAGCTCGTATCAAGCTCCTGTCAACAAGGATAACAAAAAAGAAAATGTATCTGGACTAGACAGTGAGTTCATGGAATGTGGAGATGACTGGGCATTATATATCCAAAGCAAGCACTTTGGTAAAATGAGACTCTCAACATCTGTTGCGGATTTTGTTGCAGCTACACCCATCTTTTCAGATGATGGAGCAGTTACACTTGGTTCCAAAAGTAGTACTTTGTTTGAAGTTGATGCTATAACTGGAAGGATGTTTCGAAGCTATGCTGATGGGAATGCTTCTATTATGTGGAGTGATGACATGCATAGTGTTACAAATATAGTCCGTACAAAGAATAAGGAGCTGGTTGATCTTACAACACTAAGCACACCAGAGCTTCTACTCAAGATAATTAGAACAGATTATTCTTTAAAAGCTGTGGGTCCCAGATCAGGAAAAGTTTTATGGACTATGACAGTAGCTGAATTTAACGTTTCATTAGATTGCAAACGTAATGAAAATCTATTTGCTGAGGCTTCTTTTGATTTTGAGGATAAGTATGTTTCTGACAGTGGCTTGGATTTTACTATGCCATATGCATGTCATGATATGAAAGAAGTCTTTCGCCTGCGAAAGAATTTCCTTTTACAACCTGCTATCCCTGGAAGATTACATGAAAGGCCCTCAGCACCTACATCAGATCTGGTACTTCCTTTGCAGTCTAATGTTGATAAATTCTTAAATGGTCATGATGATAATGTGATGCTTCCTACTTCTGTTCCAAATTTTTTGCCTTCTCTGCAGCAAAATATGGGCTCTTATGACAATAATGATGATGCAGCTGCCCTCTCTCAGCCTCCCACGGAGATTACTGCACCAGGAAAAGATGACTGGAACAGGGTGATAGAATGGGCAACAAAAGTATCTTTAATATTGTTTATGCTCTTACTCTTGACCTTTTTGATATACTACTATCCTCTAGTGGTTAAAAAGCAAGTCATGTTGAAGTACCAAAGCAGTGAATCTGAAATAAAAGGTGCACTTCTTAAGGGAAAGAGAGCACGTAAGTCAAGAAAGAACAATAGCATTGTTGACAAGAAGGATAAGCATCTGTCGTTAGAAGAAGATGAGGATGTAATGAAACTTATCAAAACTGATAGGGAAGCAAGGCTGCACTTTAATAAAGTTGATGAAGGGGTTGATGGACGCCGAATCGGTAAACTATTTATATCAAATAAGGAAATTGCTAAGGGAAGCAATGGTACCATTGTCCTTGAGGGAATATATGATGGCCGGGCAGTTGCTGTCAAGCGTCTAGTCCAGGCTCATCATGATGTTGCCCTTAAAGAAATTCAAAATCTCATTGCATCTGACTGTCATCCAAACATTGTCCGATGGTATGGGGTGGAACATGATCAAGATTTTGTTTACCTTGCTCTGGAACGCTGTACATGTAGCTTGAATGATTTGATTCAGATTTATCAAGATTTATCAGCAAACTCGGTGTTTAGCAAGGACCAAGCTTCCAGACAATTGATGAAGGCCCAGATAGAGATAGAAAAGGGTAATTTGCAAGATCTTTGGAAAGCAAACGGCTATCCGTCACCTCTATTATTGAAGCTAATGAGGGATGTAGTTTCTGGGCTTGTTCATTTGCATGATCTGGGAATAATACATCGTGATATGAAACCCCAAAATGTTTTGATAATCAAGGAAAGATCTCTAGGTGCAAAGCTTTCTGATATGGGCATTAGCAAACGTCTTCTTGGAGATATGTCTTCTTTGGGTCATAATGCTACTGGCTGTGGCAGTTCAGGATGGCAAGCACCAGAACAGCTTCTTCAAGGACGCCAAACAAGATCTGTGGATTTATTTAGTCTAGGTTGTGTTCTCTTTTACTGCATAACTAGGGGAAGACATCCATTCGGAGATCGTCTTGAACGTGATGTCAATATTGTGAAAAATCAAAAGGACCTTTTTTTAGTGGAGTTCATTCCTGAAGCTGATGATCTTATTTCTCGCTTATTAAACCCTGACCCTTATCTAAGGCCGAAGGCGATTGAAGTATTGCACCATCCTTTTTTCTGGAGTTCTGAGATGAGACTTTCATTTCTTCGTGACGCCAGTGACAGGGTGGAACTGGAAGATAGGGAGACTGATCTTTTGAAGGCATTAGAAAGTACTGCACCAGTGGCTTTAGGTGCAAAATGGGACGAAAAGATGGAACCGGCCTTCATTACTAACATTGGCCGATACAGGCGATATAAGTATGACAGCGTTCGTGATTTATTGCGAGTCATGAGAAACAAGCTAAATCATTATAGAGAATTGCCTCGAGAAATTCAGAAACTTGTAGGACCTGTTCCAGAAGGATTCAATGACTACTTTGCAAGTCGATTCCCTAGACTCGTGATTGAAGTGTACAAAATTATATGCAAATATTGCAAGGAGGAGGAATGTTTTCAAAGGTATTTTAATCATGTCTATTAG 2763 0.405 MVSTASGAASPPACNCCCNLIFLECGFDESKSESSHVLLGDYMEDDFKVLLLSAPRRSILSLPHKRSTSVVAALDGTIHLVENGSMRVIWSFPTGSPIYSSYQAPVNKDNKKENVSGLDSEFMECGDDWALYIQSKHFGKMRLSTSVADFVAATPIFSDDGAVTLGSKSSTLFEVDAITGRMFRSYADGNASIMWSDDMHSVTNIVRTKNKELVDLTTLSTPELLLKIIRTDYSLKAVGPRSGKVLWTMTVAEFNVSLDCKRNENLFAEASFDFEDKYVSDSGLDFTMPYACHDMKEVFRLRKNFLLQPAIPGRLHERPSAPTSDLVLPLQSNVDKFLNGHDDNVMLPTSVPNFLPSLQQNMGSYDNNDDAAALSQPPTEITAPGKDDWNRVIEWATKVSLILFMLLLLTFLIYYYPLVVKKQVMLKYQSSESEIKGALLKGKRARKSRKNNSIVDKKDKHLSLEEDEDVMKLIKTDREARLHFNKVDEGVDGRRIGKLFISNKEIAKGSNGTIVLEGIYDGRAVAVKRLVQAHHDVALKEIQNLIASDCHPNIVRWYGVEHDQDFVYLALERCTCSLNDLIQIYQDLSANSVFSKDQASRQLMKAQIEIEKGNLQDLWKANGYPSPLLLKLMRDVVSGLVHLHDLGIIHRDMKPQNVLIIKERSLGAKLSDMGISKRLLGDMSSLGHNATGCGSSGWQAPEQLLQGRQTRSVDLFSLGCVLFYCITRGRHPFGDRLERDVNIVKNQKDLFLVEFIPEADDLISRLLNPDPYLRPKAIEVLHHPFFWSSEMRLSFLRDASDRVELEDRETDLLKALESTAPVALGAKWDEKMEPAFITNIGRYRRYKYDSVRDLLRVMRNKLNHYRELPREIQKLVGPVPEGFNDYFASRFPRLVIEVYKIICKYCKEEECFQRYFNHVY 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0731 920 Coils Coil 596 616 - -
Glsi09g0731 920 ProSiteProfiles Protein kinase domain profile. 500 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0731 920 Gene3D Phosphorylase Kinase; domain 1 487 572 - -
Glsi09g0731 920 Pfam Ribonuclease 2-5A 792 916 IPR010513 GO:0004540|GO:0006397
Glsi09g0731 920 Gene3D KEN domain 792 919 IPR038357 -
Glsi09g0731 920 CDD RNase_Ire1 790 916 - -
Glsi09g0731 920 Gene3D - 57 258 IPR015943 GO:0005515
Glsi09g0731 920 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 790 920 - -
Glsi09g0731 920 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 70 251 IPR011047 -
Glsi09g0731 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Glsi09g0731 920 SMART PGNneu 849 903 - -
Glsi09g0731 920 SUPERFAMILY Protein kinase-like (PK-like) 500 790 IPR011009 -
Glsi09g0731 920 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 611 788 - -
Glsi09g0731 920 PANTHER IRE1-RELATED 141 917 IPR045133 GO:0004521|GO:0004674|GO:0030968
Glsi09g0731 920 ProSiteProfiles KEN domain profile. 789 918 IPR010513 GO:0004540|GO:0006397
Glsi09g0731 920 SMART serkin_6 500 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0731 920 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 492 572 - -
Glsi09g0731 920 Pfam Protein kinase domain 503 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0731 920 Gene3D Transferase(Phosphotransferase) domain 1 579 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0731 Glsi-ChrGlsi09 5002615 5014345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0731 526 785 MAP Kinase Kinase Kinase AT3G06030 27.652 2.28e-21 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Glsi09g0731 Pkinase 5.1e-39 CL0016