Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0728 ATGGCTGCAGGGACAGATTGCTCACTTCAGACTTCTACATTGACAGGGGGGTGCCTTAAGGGTAACAATGTATCTGCCATGGAGGACCAACATGGTAATACAGTGGAAAATTTAGATCACAATATTGGAAAACCTCCAAGAGACGTTTCAGCTATGCGCCATTGCACCAGCTCTTTATGGCTGGCTGAATCGAAAGCAGATATCGCAATTACAGGCTTCGAAACAGACACAGACGAAAAATCAGAATTTTCACCTACATTTAGATCTGGAAGCTGTTCTGAGAAAGGACCAAAGCAGTACATGGAGGATGAGTTCATCTGTATCGATATTCTCCATGAATATATTGCTCCAGGAGCTTACCTCCCTTCTCCTGGGGCATTTTATGGGGTATTTGACGGGCACGGTGGTACTGACGCGGCCTCATTTACTAGAAAGAACATCCTCAAGTTTATCACTGCAGACTCCCATTTCCCATCTGCTATTAAGAAAGCTGTTAAGAGTGCATTTATGAAGGCTGACCTTGCATTTGCAGATGCTAGTGCTCTTGATAGTTCTTCAGGCACCACTGCTTTGCTGGCCCTTATGATGGGAAGGACCATGCTAATTGCCAATGTAGGGGATTCTCGTGCTGTACTGGGCAAGCGGGGCAGAGCCGTTGAACTTTCTAAAGATCATAAACCAAATTGCTCTTCTGAAAGATTAAGAATTGAGAAACTGGGTGGTGTCATCTATGATGGATACCTCAATGGTCAATTATCAGTGGCACGCGCTCTTGGAGACTGGCACATCAAAGGTGCTAAAGGTTCTAAAAGTCCCTTGAGCTCGGAGCCTGAGCTGCAGGAGATTGTGCTGACAGAAGACGATGAGTACCTGATAATGGGGTGTGATGGCTTATGGGATGTGATGAGCAGCCAGTGTGCTGTTACGATGGTGAGGAAGGAGCTCATGCAGCATAACGACCCTGCAAGGTGTGCTAAAGCACTCGTGACTGAGGCCCTCCAACGCAACACATGCGACAATCTGACAGTTTTGGTGGTCTGTTTCTCCCAGGATCCACCTCCTAAAATTGTAGTTCCTGTATCACATAAGAGGAGGAGTATATCAGTTGAAGGGCTGGATCTTCTCAAGTGTGTCTTGAATGACGGATGA 1149 0.463 MAAGTDCSLQTSTLTGGCLKGNNVSAMEDQHGNTVENLDHNIGKPPRDVSAMRHCTSSLWLAESKADIAITGFETDTDEKSEFSPTFRSGSCSEKGPKQYMEDEFICIDILHEYIAPGAYLPSPGAFYGVFDGHGGTDAASFTRKNILKFITADSHFPSAIKKAVKSAFMKADLAFADASALDSSSGTTALLALMMGRTMLIANVGDSRAVLGKRGRAVELSKDHKPNCSSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGAKGSKSPLSSEPELQEIVLTEDDEYLIMGCDGLWDVMSSQCAVTMVRKELMQHNDPARCAKALVTEALQRNTCDNLTVLVVCFSQDPPPKIVVPVSHKRRSISVEGLDLLKCVLNDG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0728 382 PANTHER PROTEIN PHOSPHATASE 2C 75 346 IPR015655 GO:0004722|GO:0006470
Glsi09g0728 382 SUPERFAMILY PP2C-like 81 349 IPR036457 -
Glsi09g0728 382 FunFam Probable protein phosphatase 2C 22 73 351 - -
Glsi09g0728 382 Gene3D - 70 352 IPR036457 -
Glsi09g0728 382 CDD PP2Cc 87 348 IPR001932 -
Glsi09g0728 382 Pfam Protein phosphatase 2C 89 340 IPR001932 -
Glsi09g0728 382 ProSitePatterns PPM-type phosphatase domain signature. 127 135 IPR000222 GO:0043169
Glsi09g0728 382 SMART PP2C_4 78 346 IPR001932 -
Glsi09g0728 382 ProSiteProfiles PPM-type phosphatase domain profile. 88 348 IPR001932 -
Glsi09g0728 382 SMART PP2C_SIG_2 105 348 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0728 Glsi-ChrGlsi09 4982788 4984976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0728 81 381 PP2C-type Phosphatase Gene Family AT3G51470 77.741 1.18e-175 489