Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0713 ATGCAAAACCCTGCCGGAGAATCCACCAATAAGTCTCCCTCCTCTTCCCCTGATAAACACTCTCCTGCTGATACCCTTGATCCCACCCAAAACACTGGCCGTGGTAATATTGCCACTGCAGAAGGAGGTAGTGAAAACCTAGGAAACCCTCTGCAAGTGGTGGACCTTGAAAGTGGTGATGGGGGCCATATTGGGTATTCAAGATCTCCGGTGGCTGCTGTAGTGGGGGAAGGTGGGTCCTCGGTGGCGTTGGCAGTGGAGAAACGGGGCATTGATCAAAAGACAACCGTGGAGGATGGAAGCAGCAGTGGAGGACGTAGGCAAAAGAGGAAGGCGTCCCAACCATCAGATCCTCCACCCGGGACACCCACTTGCCCTGTCTGTGGGAAAGAGTTTCCGAGTTGGAAGTCTGCGTTTGGCCACATGAGAGCACACCCTGATCGAGACTATCGGGGGTTCTATAGGCCACCAGTTTTTTCTTCTTCATCATCATCCCCTACAAGGCAACGAGTTGATCAAGGAGAGAGTGGTGAGGAGCAGCAGCGTGGGGAGAAGGGACCATCGCCTACTCGAGGGCTTGCGTTTGATCTGAACCAGCCAGTGGAGGGAGTGGGCTCTTCTGAGGCTGCTGAGAGAAGTGAAGCACCGGAGTCTTCTGCTGCCGAAAAAACTGATGAGGAAAAAAAGAATGTCGGATTTGACCTAAACGAACTCCCTCCTGCTGAAGATGATGAAGACAAGCCCTAG 747 0.5315 MQNPAGESTNKSPSSSPDKHSPADTLDPTQNTGRGNIATAEGGSENLGNPLQVVDLESGDGGHIGYSRSPVAAVVGEGGSSVALAVEKRGIDQKTTVEDGSSSGGRRQKRKASQPSDPPPGTPTCPVCGKEFPSWKSAFGHMRAHPDRDYRGFYRPPVFSSSSSSPTRQRVDQGESGEEQQRGEKGPSPTRGLAFDLNQPVEGVGSSEAAERSEAPESSAAEKTDEEKKNVGFDLNELPPAEDDEDKP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0713 248 MobiDBLite consensus disorder prediction 215 233 - -
Glsi09g0713 248 MobiDBLite consensus disorder prediction 1 68 - -
Glsi09g0713 248 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 42 177 - -
Glsi09g0713 248 MobiDBLite consensus disorder prediction 145 248 - -
Glsi09g0713 248 MobiDBLite consensus disorder prediction 157 171 - -
Glsi09g0713 248 ProSitePatterns Zinc finger C2H2 type domain signature. 125 145 IPR013087 -
Glsi09g0713 248 MobiDBLite consensus disorder prediction 86 128 - -
Glsi09g0713 248 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0713 Glsi-ChrGlsi09 4905099 4905959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0713 117 169 C2H2 Transcription Factor Family AT4G35280 41.509 4.07e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi09g0713 None None None