Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0709 ATGGTCATTTCTAATGAGAACAATCCTAACTCGATCAGACCCACAAATTTCCAAGGAGGGTTAGAAATGGGTACCAGAAAGTTTGGACAGGAGGTTGGGCAGAATAGAAGGGCTTTGAGCGTCATCAATCAGAATCTAGTGGACGGTCGAGGGTACCCCTGCGTCGTTAACAAGAGAGGATTGTCACAAAAACATGAAATTTGTGAAAAAAAGCAGGCGGATCCAGTGCATCGACCAATAACGAGGAGGTTTGCTGCACAAATTGCTAGCACACAGCAATCTCGAGCTGAGGAAACTAAGAAGTCAAACCCATCAATTTCAAACTCGAATGGATTTGGAGACTCTATATTCGTTGATGATGAACACAAGTCACCGAAAGACGAGCCAGTGCCCATGTCTTTAGAGCAAACGGAATCAATCCAAAGTGAACCAGATCAGATGGAGGAAGTCGAGATGGAGGATATAGTTGAAGATCCTATTATGGACATCGATAGCAGTGATATGAATAACCCTCTTGCAGTCGTAGGCTATGTCGAAGATCTTTATTCCTGCTATAGAAAAATGGAGAGTTGTAATTGTGTCTCACCAAATTATATGGGACAACAATTAGACATTAATGAAAGGATGAGAGCTATACTGATTGACTGGCTTATTGAGGTGCAGGACAAATTTGACCTCATGCCCGAGACTCTGTTTCTTACAGTTAACCTGATAGATAGATTTTTGGAGAAGCAGTCAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTGGTTGCCATGCTTTTGGCATGCAAGTACGAGGAAGTTTCGGTCCCCGTGGTCGGGGATCTAATCCTTATATCAGACAAAGCATACACGAGGAAAGAAGTTCTGGAAATGGAGAAGTTGATGCTCAATAAATTGCAGTTTAACGTGTCAGTGCCAACATCATATGTCTTTATGAGAAGGTTCCTTAAGGCAGCTCAAGCAGACAGAAAATTGGAATTATTAGCTTTCTTCTTGATAGAGCTATCCCTTGTGGAATATGAGATGCTGAAGTTCCCACCATCTTTGCTGGCTGCAGCTGCAGTTTATGCAGCTCAATGCACTATATATGGTGTCAAACAGTGGAGTAAGACATTCGAAAGTCATACGAACTACTCAGAAGATCAGCTATTAGAATGCTCTAGTCTGATGGTTGATTTGCACCAGAAGGCTGGAAGTGGGAAACTTACAGGGGTACATAGGAAGTACTGCTCATCTAAATTCAACTATACAGCAAAATGTGAACCAGCACGTTTTCTTCTGGAGAACCAATTGTAG 1302 0.4224 MVISNENNPNSIRPTNFQGGLEMGTRKFGQEVGQNRRALSVINQNLVDGRGYPCVVNKRGLSQKHEICEKKQADPVHRPITRRFAAQIASTQQSRAEETKKSNPSISNSNGFGDSIFVDDEHKSPKDEPVPMSLEQTESIQSEPDQMEEVEMEDIVEDPIMDIDSSDMNNPLAVVGYVEDLYSCYRKMESCNCVSPNYMGQQLDINERMRAILIDWLIEVQDKFDLMPETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLMLNKLQFNVSVPTSYVFMRRFLKAAQADRKLELLAFFLIELSLVEYEMLKFPPSLLAAAAVYAAQCTIYGVKQWSKTFESHTNYSEDQLLECSSLMVDLHQKAGSGKLTGVHRKYCSSKFNYTAKCEPARFLLENQL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0709 433 CDD CYCLIN_AtCycB-like_rpt1 157 303 - -
Glsi09g0709 433 Pfam Cyclin, N-terminal domain 181 305 IPR006671 -
Glsi09g0709 433 PANTHER CYCLINS 135 398 IPR039361 -
Glsi09g0709 433 FunFam G2/mitotic-specific cyclin-1 294 420 - -
Glsi09g0709 433 Gene3D - 194 306 - -
Glsi09g0709 433 SMART Cyclin_C_2 308 425 IPR004367 -
Glsi09g0709 433 Gene3D - 180 420 - -
Glsi09g0709 433 ProSitePatterns Cyclins signature. 210 241 IPR006671 -
Glsi09g0709 433 Pfam Cyclin, C-terminal domain 308 423 IPR004367 -
Glsi09g0709 433 SMART cyclin_7 215 299 IPR013763 -
Glsi09g0709 433 SMART cyclin_7 312 394 IPR013763 -
Glsi09g0709 433 MobiDBLite consensus disorder prediction 88 147 - -
Glsi09g0709 433 SUPERFAMILY Cyclin-like 307 425 IPR036915 -
Glsi09g0709 433 MobiDBLite consensus disorder prediction 88 114 - -
Glsi09g0709 433 SUPERFAMILY Cyclin-like 169 305 IPR036915 -
Glsi09g0709 433 PIRSF Cyclin_A_B_D_E 5 433 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0709 Glsi-ChrGlsi09 4874797 4877537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0709 1 429 Core Cell Cycle Gene Families AT1G20610 57.737 8.70e-174 491