Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0705 ATGATGTTTCCAGTGGCGAAAATATCATCCGACAGCGAAGAGGAGGAAAGGGTAGAAGAGAGTGAAATGGATAATGGAAACGATGATGAAGGGGTGAATGAGAATAGAAAGAAGAAGATAATGATAAGGGTGGTTTTTGGTCAGAGGTTGAGAACAACAGCGATGGCAAGTTGCAGTGATTCTTCGTTGTGTTGCCAGGCAGATGAATGTGGGATGGACTTGAGAATGGCGAAGAAGTATCACCAGAGGCATAAGGTTTGCGACAGACATTCTAAAGCTGCTGTGGTTTTGCTTAGCGGCATTCGTCAGAGGTTTCATGAAATTTCAGAGTTTGATGACACCAAAAGAAGTTGCAGGGAAAGATTGGCAGGTCACAACGAACGTAGAAGAAAAACCCACGCAGGCCTACATTCTGGGACTACTAAACAGATGCCATAG 438 0.4429 MMFPVAKISSDSEEEERVEESEMDNGNDDEGVNENRKKKIMIRVVFGQRLRTTAMASCSDSSLCCQADECGMDLRMAKKYHQRHKVCDRHSKAAVVLLSGIRQRFHEISEFDDTKRSCRERLAGHNERRRKTHAGLHSGTTKQMP 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0705 145 SUPERFAMILY SBT domain 63 135 IPR036893 GO:0003677|GO:0005634
Glsi09g0705 145 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 21 134 IPR044817 GO:0003677
Glsi09g0705 145 ProSiteProfiles Zinc finger SBP-type profile. 62 132 IPR004333 GO:0003677
Glsi09g0705 145 MobiDBLite consensus disorder prediction 1 32 - -
Glsi09g0705 145 MobiDBLite consensus disorder prediction 121 145 - -
Glsi09g0705 145 Gene3D - 56 119 IPR036893 GO:0003677|GO:0005634
Glsi09g0705 145 Pfam SBP domain 65 131 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0705 Glsi-ChrGlsi09 4851125 4852142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0705 65 132 SBP-box Gene Family AT1G53160 58.667 2.58e-25 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Glsi09g0705 SBP 2.8e-21 No_clan