Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0690 ATGGTGATGGAGGAAGACGTTCAGAGCTGTGGGAGTAGAGCCCTGCAGTCACCGCAGCCCCATCCTCGTCAGCACAGGCAGAAATTGGAGGCCTACAATGAAGTGCTTCGTCGAATTCAGGAGTCCAATTTTGAGGAGGCCAATGTTCCAGGTTTTGATGATCATCTATGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCATTGGAAGTGAATGTGGAGAGGGCAGAAGATGTTCTTGCTCATAAGAGACTGCTGAAGTTGGCAGAGGACCCTGCCAATCGACCAGCGTTTCAAGTTCGCTTAGTACAGGTATATCCTTTTGGTAGTGCAAATTATGTTGACTCCATGCATTCAGATCCTTCTGAGAAAGATGATGCACAGAGCTCTTTTAACTATTCTTTCAAGCAGGGAATACATCCGCCACCAACTTTCGGTTCATCCTCTAATCTTGAAGCTCTTGCACTTCAAGCAAGTAAAAAGAATATTGAAGATGGGGATAGTACTACGGGTGTGAAACCATATTCTTACTGGCCCATGCACGAGATTACCTTTTCAACAGTTGACAAGCCTAAAGTCCTTAGTCAGTTAACTTCATTACTTGGTGAGATTGGACTAAATATTCATGAAGCTCATGCATTTTCCACCAATGATGGCTTTTCTCTGGATGTCTTTGTCGTTGAGGGTTGGCCTAATGAGGAAACTGAGGAGCTCAAAGGTGTATTGGAAAAGGAAATTTTGAAGTTTAAGCAGGAGCAATTTCTGTCAAAACAGGGCGTACTTGATGCCACCAACGATGATTACCAGGCAAGGATGGAACCTGTCCTTCATTGCATAGAAATACCATCTGATGGAACTGATGTCTGGGAAATTGATACCAACCAGCTGAAATTTGAAAACAAAGTTGGTTCTGGATCATTCGGTGACTTGTACAGAGGCACATATTGTAGTCAAGATGTGGCTATCAAAGTCCTCAAACCTGATCGCATAAACACAGATATGTTGAGAGAGTTTGCACAGGAAGTTTATATCATGAGGAAGGTTCGACACAAGAATGTTGTCCAGTTCATTGGTGCATGTACTCAGCCGCCAAATCTGTGCATTGTTACCGAATTTATGTCTGGAGGAAGCGTTTATGACTTTCTGCACAAAAAAAGGGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTAGCAATTGATGTTTCCAAGGGAATGAGCTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTGCTGATGGATGAAAATGAAGTGGTAAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAACTCAATCTGGAGTGATGACAGCTGAAACTGGAACATACCGCTGGATGGCTCCTGAGATCATTGAACACAAACCATATGACCAGAAGGCCGATGTTTTCAGTTTTGGAATAGCTCTTTGGGAGCTTCTAACCGGAGATCTGCCTTACTCTTACTTGACCCCATTACAAGCAGCAGTAGGCGTGGTGCAGAAGGGACTAAGACCTACAATTCCCAAGAATGCACACCCAAGACTTTCTCAACTGCTCCAGCGTTGCTGGCAACAAGATCCAACGGAGAGACCAGATTTCTCTGAAATAATAGAAATTCTTCAGCTGATAGCTAAAGAGGTTATTGATGAAAAAGCAGATCGACATAAAGGTAAAACATCCCCCAGCTTCTTGTCATCACTTAGATGGGCCCATCACTGA 1734 0.4343 MVMEEDVQSCGSRALQSPQPHPRQHRQKLEAYNEVLRRIQESNFEEANVPGFDDHLWLHFNRLPARYALEVNVERAEDVLAHKRLLKLAEDPANRPAFQVRLVQVYPFGSANYVDSMHSDPSEKDDAQSSFNYSFKQGIHPPPTFGSSSNLEALALQASKKNIEDGDSTTGVKPYSYWPMHEITFSTVDKPKVLSQLTSLLGEIGLNIHEAHAFSTNDGFSLDVFVVEGWPNEETEELKGVLEKEILKFKQEQFLSKQGVLDATNDDYQARMEPVLHCIEIPSDGTDVWEIDTNQLKFENKVGSGSFGDLYRGTYCSQDVAIKVLKPDRINTDMLREFAQEVYIMRKVRHKNVVQFIGACTQPPNLCIVTEFMSGGSVYDFLHKKRGVFKLPSLLKVAIDVSKGMSYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEIIEHKPYDQKADVFSFGIALWELLTGDLPYSYLTPLQAAVGVVQKGLRPTIPKNAHPRLSQLLQRCWQQDPTERPDFSEIIEILQLIAKEVIDEKADRHKGKTSPSFLSSLRWAHH 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0690 577 ProSiteProfiles ACT domain profile. 182 262 IPR002912 -
Glsi09g0690 577 Gene3D Transferase(Phosphotransferase) domain 1 375 569 - -
Glsi09g0690 577 FunFam serine/threonine-protein kinase HT1 375 565 - -
Glsi09g0690 577 CDD STKc_MAP3K-like 302 545 - -
Glsi09g0690 577 Gene3D Phosphorylase Kinase; domain 1 285 374 - -
Glsi09g0690 577 SUPERFAMILY ACT-like 180 246 IPR045865 -
Glsi09g0690 577 ProSiteProfiles Protein kinase domain profile. 296 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0690 577 FunFam Serine/threonine-protein kinase isoform 1 286 374 - -
Glsi09g0690 577 MobiDBLite consensus disorder prediction 1 26 - -
Glsi09g0690 577 SUPERFAMILY Protein kinase-like (PK-like) 278 545 IPR011009 -
Glsi09g0690 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Glsi09g0690 577 Pfam Protein tyrosine and serine/threonine kinase 296 545 IPR001245 GO:0004672|GO:0006468
Glsi09g0690 577 ProSitePatterns Protein kinases ATP-binding region signature. 302 323 IPR017441 GO:0005524
Glsi09g0690 577 Coils Coil 232 252 - -
Glsi09g0690 577 PRINTS Tyrosine kinase catalytic domain signature 370 383 IPR001245 GO:0004672|GO:0006468
Glsi09g0690 577 PRINTS Tyrosine kinase catalytic domain signature 453 463 IPR001245 GO:0004672|GO:0006468
Glsi09g0690 577 PRINTS Tyrosine kinase catalytic domain signature 472 494 IPR001245 GO:0004672|GO:0006468
Glsi09g0690 577 PRINTS Tyrosine kinase catalytic domain signature 516 538 IPR001245 GO:0004672|GO:0006468
Glsi09g0690 577 PRINTS Tyrosine kinase catalytic domain signature 407 425 IPR001245 GO:0004672|GO:0006468
Glsi09g0690 577 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 173 550 - -
Glsi09g0690 577 SMART serkin_6 296 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0690 577 CDD ACT_TyrKc 180 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0690 Glsi-ChrGlsi09 4772359 4782057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0690 2 576 MAP Kinase Kinase Kinase AT4G35780 67.938 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Glsi09g0690 PK_Tyr_Ser-Thr 6.1e-75 CL0016