Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0687 ATGAATTCTAGTTCTTCTCAGGTTTATAACCAGCTTCCACAGGGGCTATTGCCGACAGAAGCATCACCCCCGTGGAACAACAAAGCCGACAATGAATGGCAGCTCACAGCAGCCACTCTGGTGGGCCTACAGAGCGTTCCTGGGCTTGTGCTTCTATATGGGAGCATGGTTAAGAGGAAGTGGGCTGTCAATTCTGCCTTCATGGCCCTATACGCCTTTGCGGCGGTTCTCGTTTGTTGGGTCTTATGGGCCCATGGCATGGCGTTTGGCACCAAGCTTATGCCATTGGTGGGAGTGCCCAACCATGCTCTGACTGAGAAGTTCCTTCTTGCTCAGTCCATACAGGGTTCTTTTCCAATGGCTGACTTCGTGTTTTATCAGTTTGCTTTTGCTGCGATTACTGTTATATTGCTTGCGGGGTCTTTGCTGGGGAGAATGAACTTCTATGCATGGATGCTGTTTGTTCCTCTGTGGCTTACACTGTCTTACACCATAGGTGCCTTCAGCATCTGGGGTAATAAAGGGTTCCTAGAAAAAAAAATCATTGATTATGCTGGTGGCTTCGTCATTCATCTTTCTTCTGGGGTCGCAGGCTTCACAGCCGCTTATTGGGTTGGTCCAAGAACTTCAGATGACAGGCAAAACTTTCCACCTAATAACATAATTCACATACTTGGAGGTGCAGGGTTTCTTTGGATGGGGTGGGCAGGTTTCAACGGTGGAGCTCCATTTCAAGTAGGAGAGATCGCATCCTTGGCCATCTACAACACCCATTTATGCACTGCCACAAGTCTACTGGTTTGGCTTTCCCTTGATATGGTTGTCTATAATAAGAGCTCTGTGATAGGTGCCGTCCAGGGTATGATCACTGGCCTAGTTTGCATCACCCCAGGTGCAGGGTTGGTGGATCCCTGGGCAGCAGTGGTGATGGGAGCACTTTCGGGTTCGATACCGTGGTACACCATGATGGTATTGCACAGGAGATCGGCATTCTTTCAGACTGTAGATGACACATTAGGGGTGTTCCATACTCATGCTGTTGCGGGGATTCTGGGAGGAGTCCTTTCTGGAGTATTCGCCAAACCCAACCTTCTGAGAATGATGTATGGCCCTCACGTGCCGTATGGTCCAGGATTACTATACAGCTTTTATGAGGGGAAAGTGGTTGTAGGCTTCATCCAAATGGGTAACCAGCTCATGGGAGCAATTTTTGTTACGGTGTGGAATGCCATTATCACAAGCCTCATCTGTATTCTCATAAGCCGCATTGTTGATCTTAGGATGAATGAAGAGGACCTTGAGGTTGGTGACGATGCAGTTCACGGAGAAGAAGCCTATGCATTGTGGGGGGATGGAGAAAGAATGCGAGTCCCTCTTCGTCTCCGTCCAACACTTCCTTCCATGTTCCGCCAGCGACTTTCACTTCCATTCTATACACAAAAAATGGATGATAAATAG 1458 0.4835 MNSSSSQVYNQLPQGLLPTEASPPWNNKADNEWQLTAATLVGLQSVPGLVLLYGSMVKRKWAVNSAFMALYAFAAVLVCWVLWAHGMAFGTKLMPLVGVPNHALTEKFLLAQSIQGSFPMADFVFYQFAFAAITVILLAGSLLGRMNFYAWMLFVPLWLTLSYTIGAFSIWGNKGFLEKKIIDYAGGFVIHLSSGVAGFTAAYWVGPRTSDDRQNFPPNNIIHILGGAGFLWMGWAGFNGGAPFQVGEIASLAIYNTHLCTATSLLVWLSLDMVVYNKSSVIGAVQGMITGLVCITPGAGLVDPWAAVVMGALSGSIPWYTMMVLHRRSAFFQTVDDTLGVFHTHAVAGILGGVLSGVFAKPNLLRMMYGPHVPYGPGLLYSFYEGKVVVGFIQMGNQLMGAIFVTVWNAIITSLICILISRIVDLRMNEEDLEVGDDAVHGEEAYALWGDGERMRVPLRLRPTLPSMFRQRLSLPFYTQKMDDK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0687 485 PANTHER AMMONIUM TRANSPORTER MEP2 15 455 IPR001905 GO:0008519|GO:0016020|GO:0072488
Glsi09g0687 485 PRINTS Rhesus blood group protein signature 253 275 IPR002229 GO:0005886
Glsi09g0687 485 PRINTS Rhesus blood group protein signature 346 362 IPR002229 GO:0005886
Glsi09g0687 485 PRINTS Rhesus blood group protein signature 127 143 IPR002229 GO:0005886
Glsi09g0687 485 PRINTS Rhesus blood group protein signature 222 240 IPR002229 GO:0005886
Glsi09g0687 485 NCBIfam ammonium transporter 30 446 IPR001905 GO:0008519|GO:0016020|GO:0072488
Glsi09g0687 485 SUPERFAMILY Ammonium transporter 25 427 - -
Glsi09g0687 485 Gene3D Ammonium transporter AmtB like domains 9 449 IPR029020 -
Glsi09g0687 485 Pfam Ammonium Transporter Family 33 446 IPR024041 GO:0008519|GO:0016020|GO:0072488
Glsi09g0687 485 ProSitePatterns Ammonium transporters signature. 183 208 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0687 Glsi-ChrGlsi09 4741886 4743590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0687 120 454 Inorganic Solute Cotransporters AT2G38290 57.612 1.57e-133 389