Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0675 ATGCCTCATGGGCGTGACACTCCAAGTATCATTACTAACATGGCTATTATAATTGCAGTCTTGAGCTCAATTATTATGTTCTCAGTAGTTCCTATAGGGAATTCACTTAGCTTAAACTACTATGAAAAGAGATGCCCTGACGTGGAGTTCATTGTTGCTAAGGTCGTGAAGGAAGCCACTGCTAAAGACAAAACTGTTCCTGCAGCACTTCTCCGAATGCACTTCCATGATTGTTTCATTAGGGGATGTGATGCTTCAGTGCTGCTAAACTCAAAAGGAAACAACAAAGCAGAAAAAGATGGACCACCAAATATTTCTTTGCATGCATTCTATGTCATTGATAATGCAAAGAACCAAGTAGAAACTTCATGCCCTGGTGTGGTCTCATGTGCTGATATCCTAGCACTAGCAGCAAGGGATGCAGTTTTTCTGTCCGGAGGTCCAAGTTGGGATGTTCCTAAAGGAAGAAAGGATGGAAGAACATCTAAGGCCAGTGAAACCATACAACTGCCAGCGCCAACCTTCAACTTATCACAATTGCAGCAGAGCTTCTCTCAAAGAGGTCTGTCAATAGAAGACCTGGTAGCACTGTCAGGAGGACATACTTTAGGTTTCTCTCATTGCTCATCCTTCCAGAACAGAATCCACAATTTCAACACTACATTCGACGTGGACCCTTCATTAAATCCATCCTTTGCAGCAAAATTAAAGTCAATTTGTCCACTCAAAAGTAACGCAAAGAATGCAGGCACCAGCATGGACCTTTCTTCTACTATTTTTGATAATACTTATTACAAGTCAATCCTGCAAGGGAAGAGTTTGTTTTCTTCTGATCAGGCTCTGCTTAATACCCCAAAGACCAAGGACTTGGTTTCCAACTTTGCTACTTCAGAAGAGGCATTTTACAAGGCTTTTGTGAATTCTATGATCAAAATGAGTAGCATCAATGGCGGGCAAGAGATTAGGAAGGACTGCAGAGTGGTCAACTAG 990 0.4182 MPHGRDTPSIITNMAIIIAVLSSIIMFSVVPIGNSLSLNYYEKRCPDVEFIVAKVVKEATAKDKTVPAALLRMHFHDCFIRGCDASVLLNSKGNNKAEKDGPPNISLHAFYVIDNAKNQVETSCPGVVSCADILALAARDAVFLSGGPSWDVPKGRKDGRTSKASETIQLPAPTFNLSQLQQSFSQRGLSIEDLVALSGGHTLGFSHCSSFQNRIHNFNTTFDVDPSLNPSFAAKLKSICPLKSNAKNAGTSMDLSSTIFDNTYYKSILQGKSLFSSDQALLNTPKTKDLVSNFATSEEAFYKAFVNSMIKMSSINGGQEIRKDCRVVN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0675 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Glsi09g0675 329 PANTHER PEROXIDASE 25-RELATED 24 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 ProSiteProfiles Plant heme peroxidase family profile. 35 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 Gene3D - 39 329 - -
Glsi09g0675 329 Gene3D Peroxidase, domain 2 171 312 - -
Glsi09g0675 329 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 Pfam Peroxidase 52 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 SUPERFAMILY Heme-dependent peroxidases 36 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 CDD secretory_peroxidase 36 328 IPR033905 GO:0004601|GO:0042744
Glsi09g0675 329 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0675 329 FunFam Peroxidase 39 183 - -
Glsi09g0675 329 FunFam Peroxidase 171 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0675 Glsi-ChrGlsi09 4662146 4663860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0675 24 328 Peroxidase AT5G42180 68.301 3.53e-158 443