Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0660 ATGGTCATGGCGAAGAGGAACTCAAAGGTTGTTATATCATCGGATGATGAATATGATGCTAGTATTCGTTCACTGAGTTCAAATAGTAGCTACGCGAAGTCCAAGTCAAGGTCTACAAGCAGCAGAGGAAAGAAGAAGGCGCGCCTATCGGGTTCTCGGTCTCGCTCGTCCAAAGACTCAGGCAAGTTGCATGAGCTCAAACTACTTGGAGAAGACTTCAATGAAGTGTTTACTGGGTTCAACGAATCTCCTGGTACTCAAAGGAGTAAACCAGAGGAGCTATGGGTTGATAAACACAAGCCCCATTCACTGGAAGAGCTTGCTGTTCACAAGAAAAAGGTTGAAGAGGTTAAGCTGTGGTTTGAGGAAAGATTGAAACCTTCGAAGGGTGTCTGTCGTAGTAACATTCTTCTCATCAGTGGGCGGGCTGGAGTTGGAAAATCTGCTGCTATTCATGTAATTGCATCGCACCTTGGAGCTATACTGTGGATACAATACACTTCCAAGTTGGATGAGTTTGAAATTTTTGTTGAGAGAATACGGAAATATGGGTTAAGGCCAACTTTCTTTCACGGGGAGTCAAAATCATCTATCATACTTTTAATTGATGATCTTCCTGTGACAAATGGGAAAGCTGCTTTTGGAAAACTTAAAGATTGCTTGCACCTGTTGGTGCACTCAACTCAGATACCTACAGCCATATTGGTTACCGACTACTGCAATGCTGATTCAGCAGACAATAATGCAAGGTGCTTGGAAGAACTTCAGCTATCTCTAGAGAGTGCTGGGGCTTGTAAGATTGTGTTCAATCCCATTACCATAAATTCTATTAAGAAGGTACTTTTTAGAATATCGCAACTGGAGCAATGTTATGTGACTGCAGAACATGTTGATCTGATTGCGAAAGCAAGTGGAGGTGACATCAGACATGCAATCACGTCATTACAGTTTTTCTGTTTGAACCAGAATCAAATGCATTCTTTGTCTCTATCCACTCCCTCTCTTAGTGTATCAACAGAGAGAGAAAACAAGACTGTTACTTTAGATGATGACTATTCCTTGCACTTCAGCAGAGATGAGACACTTTCTTTATTTCATGCCTTGGGGAAATTTTTGCACAACAAAAGAGAGACCGGAAGTGCAATAGAAGATGACCAAGATACGTTCCTTATCCAAGGAAGATTTGCTAGATTACCATTAAAAATGGATGCCCCAGAGAAGATTCTTTGTCAAGCCCATGTTCAACCTGGTCGTATTGCTGATTTTCTCCATGAAAATGTGCCAGATTTTTTGAATGAGGAGGCAATTGATGATGTGTGGACTGTGTCTTCATATCTAGGCGATGCTGACATTCTTCTTGCTAAACATCTGGGAATGATATCTAGATATAATGAGGCAGAGGGTGTTCTACCATCAGCTGCTGCTTCTGTTGTTGTTCGTGGGGTACTATTTGGAAATTCTCATCCACTATCCTCCAGGTGGCATGTTATTCGCCGGCCAAAGCTGTGGCAGGTTGAGAAAGAATCATTATACAACAAGAATGAAATGTATAGGCAGAGAAGCGCTGCTTGTATAGGGTTGAGTTCTTGTCATATGTCGGTTATGGCCACAGAGTACATGCCTGTGTTTAAATTGCTTGGAAATAGGGCATGTGGTGGATATCTTGAATCTCCTCAGTTACCGGTGCATAACTTGGATATGGGAGGTTTTGATTTTGACAAAATGACTTTACATGACCAAGCAAACAGGACTTGTGATGATGACGATGACTATGATGAAATAGAAGATTGGTAG 1794 0.4169 MVMAKRNSKVVISSDDEYDASIRSLSSNSSYAKSKSRSTSSRGKKKARLSGSRSRSSKDSGKLHELKLLGEDFNEVFTGFNESPGTQRSKPEELWVDKHKPHSLEELAVHKKKVEEVKLWFEERLKPSKGVCRSNILLISGRAGVGKSAAIHVIASHLGAILWIQYTSKLDEFEIFVERIRKYGLRPTFFHGESKSSIILLIDDLPVTNGKAAFGKLKDCLHLLVHSTQIPTAILVTDYCNADSADNNARCLEELQLSLESAGACKIVFNPITINSIKKVLFRISQLEQCYVTAEHVDLIAKASGGDIRHAITSLQFFCLNQNQMHSLSLSTPSLSVSTERENKTVTLDDDYSLHFSRDETLSLFHALGKFLHNKRETGSAIEDDQDTFLIQGRFARLPLKMDAPEKILCQAHVQPGRIADFLHENVPDFLNEEAIDDVWTVSSYLGDADILLAKHLGMISRYNEAEGVLPSAAASVVVRGVLFGNSHPLSSRWHVIRRPKLWQVEKESLYNKNEMYRQRSAACIGLSSCHMSVMATEYMPVFKLLGNRACGGYLESPQLPVHNLDMGGFDFDKMTLHDQANRTCDDDDDYDEIEDW 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0660 597 Gene3D - 275 331 - -
Glsi09g0660 597 Pfam Rad17 P-loop domain 92 160 - -
Glsi09g0660 597 MobiDBLite consensus disorder prediction 26 61 - -
Glsi09g0660 597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 322 IPR027417 -
Glsi09g0660 597 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 82 548 IPR004582 GO:0006281
Glsi09g0660 597 Gene3D - 92 254 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0660 78 352 Core DNA Replication Machinery Family AT1G77470 20.714 4.56e-07 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0660 09 4558233 4563219 Glsi09g0660 09 4558233 4563219 ECH