Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0622 ATGATGGAGTCTTGTGTCCCACCTGGGTTTCGTTTCCACCCAACCGATGAAGAGCTTGTTGGCTATTATCTGAGGAAGAAAGTAGCTTCTCAGAAGATTGATCTTGACGTTATCAGAGAGATCGATCTATATCGTATAGAACCATGGGATCTTCAAGAGAGATGCAGGATCGGGTATGAGGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGACAAGAAGTATCCAACTGGGACGAGGACTAACAGAGCTACCATGGCGGGGTTCTGGAAGGCGACAGGAAGAGACAAGGCAGTATACGATAAGGCAAAACTCATTGGTATGAGGAAGACCCTCGTTTTCTACAAAGGGAGAGCTCCTAATGGTCAGAAAAGTGACTGGATCATGCACGAATATAGGCTCGAATCTGATGAGAATGGACCTCCACAGGAAGAAGGATGGGTTGTATGCAGAGCTTTCAAGAAAAAAACCAATAGCCAATCGAAGAGCATTGAAGGATGGGATTCAAGCTACTTCTTCGACGAAACTAGTGGAGTCAGCTCGGTCGTCGATCCAGTTGATCTTATTTCAAGGCAGCCTCGGAGTTATTTAGCTCAAAATTATTTGTGCAAGCGAGAGATAGAAGCAGCGGATAGCTTGAGTTTCATGCACTCAGACCACTTTATACAGCTTCCTCATCTAGAAAGCCCGTCTTTGCCATTGATGAAGAGGCCAAGCTCAGTGTCTTTAATATCAGACAATAATGAAGAAGATGACCAAAATAGATTACCCAACAACACAAAGAAAGTGACTGATTGGAGGGCTCTCGACAAGTTTGTGGCTTCTCAGTTAATGAGTGAAGAAGACAGGCGCGAAAATGATGGAGTGTCCAGCTTTGAGACCCCTACCAGCTCGGACATGGCGTTTCTGTTACCGCAGAGTAGTAGGGATGAAGGGAACAAGTTAAACCCATTTTTAAATACAAGCTCAGACTGCGATTTTGGGATATGCGTGTTTGAAAAATGA 1005 0.4448 MMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKAKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKKTNSQSKSIEGWDSSYFFDETSGVSSVVDPVDLISRQPRSYLAQNYLCKREIEAADSLSFMHSDHFIQLPHLESPSLPLMKRPSSVSLISDNNEEDDQNRLPNNTKKVTDWRALDKFVASQLMSEEDRRENDGVSSFETPTSSDMAFLLPQSSRDEGNKLNPFLNTSSDCDFGICVFEK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0622 334 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Glsi09g0622 334 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Glsi09g0622 334 FunFam NAC domain-containing protein 15 159 - -
Glsi09g0622 334 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
Glsi09g0622 334 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Glsi09g0622 334 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0622 Glsi-ChrGlsi09 4300028 4302175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0622 2 333 NAC Transcription Factor Family AT2G18060 64.658 9.17e-163 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi09g0622 NAM 4.6e-38 No_clan