Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0621 ATGCTTACTGAGATTCTTGCAAGCTGCAATTACTTTGCCATAGAATGCCTCGGGAAGATGTGGCATCTTCGGCGAGACACAGGAACCAACCACCGAGAAAGGGCAACAGATCTCGCTCTCTGCTTGGCCCTTTGGCTAATCGTTGCGAATTTGTTTCTGAGGAAAATGACTGCTTTCAGCGGCGATGAAACTGCTCCATTTTTCGGCTTCCTCGGAGCCGCCGCTGCTCTTGTTTTCTCCTGTATGGGAGCGGCTTACGGCACGGCGAAAAGTGGTGTCGGGGTTGCCTCCATGGGTGTCATGAGACCGGAGCTTGTGATGAAATCTATAGTACCCGTTGTTATGGCTGGTGTCTTGGGTATCTATGGTTTAATCATTGCGGTCATCATCAGTACCGGCATTAACCCCAAGGCCAAATCCTACTATCTCTTTGATGGTTACGCCCACCTGTCTTCCGGTCTTGCTTGTGGGCTTGCTGGCCTTTCTGCTGGCATGGCAATTGGTATTGTAGGCGATGCTGGTGTTAGGTATATTTTGTTTCTCCCCACTCTCTTTCTTATATCTTCGGCTGATTGA 576 0.4965 MLTEILASCNYFAIECLGKMWHLRRDTGTNHRERATDLALCLALWLIVANLFLRKMTAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRYILFLPTLFLISSAD 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0621 191 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 56 185 - -
Glsi09g0621 191 NCBIfam V-type ATPase subunit C 67 175 IPR011555 GO:0033179|GO:0046961|GO:1902600
Glsi09g0621 191 PRINTS Vacuolar ATP synthase 16kDa subunit signature 110 134 IPR000245 GO:0033179|GO:0046961|GO:1902600
Glsi09g0621 191 PRINTS Vacuolar ATP synthase 16kDa subunit signature 84 108 IPR000245 GO:0033179|GO:0046961|GO:1902600
Glsi09g0621 191 PRINTS Vacuolar ATP synthase 16kDa subunit signature 161 187 IPR000245 GO:0033179|GO:0046961|GO:1902600
Glsi09g0621 191 SUPERFAMILY F1F0 ATP synthase subunit C 141 182 IPR035921 -
Glsi09g0621 191 SUPERFAMILY F1F0 ATP synthase subunit C 68 131 IPR035921 -
Glsi09g0621 191 Pfam ATP synthase subunit C 151 185 IPR002379 GO:0015078|GO:0033177|GO:1902600
Glsi09g0621 191 Pfam ATP synthase subunit C 71 130 IPR002379 GO:0015078|GO:0033177|GO:1902600
Glsi09g0621 191 CDD ATP-synt_Vo_c_ATP6C_rpt1 67 134 - -
Glsi09g0621 191 Gene3D - 65 187 IPR035921 -
Glsi09g0621 191 FunFam V-type proton ATPase proteolipid subunit 65 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0621 Glsi-ChrGlsi09 4291259 4293933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0621 56 186 Primary Pumps ATPases(2) AT2G16510 93.130 5.00e-81 236