Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0601 ATGGCGGGTTTTTTTTCATTAGGCGGCGGAGGGAGAGGGAACAACCAGCAACCAGAACAAGGACATAACCCTCCCACGGAATTTCCTCCCCCTGACACCTCATATTGGTATAAGAACGAAGATGTGTCCTCCTACAGAAGCTTGGAGCTATGGAACCAGCAGCAGGAGCAGCTCATCCCTCAGGCGCGCCAGCTTCACCATCCTCATCAAGATCTTTACTCGTCAGCGGCTGCGTTAGGTGTTGGGCCCAGTAGGAGCTCCATTAACGTCTCTGATGATCAGTCATCGCCAAGATCAGCCATGATGGCGATGAGTGCCAGCATGGGAGGCGGACGAGGAGAAGAAGGGTTAGAGCATGAAAATTTTCCTGCAGTGCTAAGCTCTCCTGCGGAGTTCCACTGCGTGCGGGTTAGCTCGATGGACGACGCTGACGAACAATACGCATACCAAACGGCAGTAAACATTGGAGGGCACGTGTTCAGAGGAATTCTCTATGACCAAGGTCCCGATTATAATTACATGGCTGGGGAGAGCGCCTCCGCTGGTGTTGGAGGAGTTCAACCCTTGAACCTCATTGCGGGTGCCCCCTCAGTTGAATCTGGTTTACCCACAAGCGCAACAACCATGGTTTCGTCTACTGGGCCACTTGTCGATCCTTCTTCTTTGTATCCATCTCCAGCTCCACTTAACACCTTCATGTCTGGTAGTGGAGGGAGGGATTTCTTTGAAAAGCCACGCCAACGACCAAAAAAGACTAGGTATTGGGGTAGTAGGTTAAGCCCAGAAACGTTGGAGCCTAGGGCATCACAGTGCTGGGCGCTGCATTGTGGTGGCCCCAACAAGCCGTATTCTGCTCTGTTGATAGAACGAACAGAATTAAGGAGGTAA 888 0.5191 MAGFFSLGGGGRGNNQQPEQGHNPPTEFPPPDTSYWYKNEDVSSYRSLELWNQQQEQLIPQARQLHHPHQDLYSSAAALGVGPSRSSINVSDDQSSPRSAMMAMSASMGGGRGEEGLEHENFPAVLSSPAEFHCVRVSSMDDADEQYAYQTAVNIGGHVFRGILYDQGPDYNYMAGESASAGVGGVQPLNLIAGAPSVESGLPTSATTMVSSTGPLVDPSSLYPSPAPLNTFMSGSGGRDFFEKPRQRPKKTRYWGSRLSPETLEPRASQCWALHCGGPNKPYSALLIERTELRR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0601 295 NCBIfam LRP1 C-terminal domain 122 169 IPR006511 -
Glsi09g0601 295 MobiDBLite consensus disorder prediction 1 39 - -
Glsi09g0601 295 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 97 230 IPR007818 GO:0003700|GO:0006355
Glsi09g0601 295 Pfam Domain of unknown function (DUF702) 94 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0601 Glsi-ChrGlsi09 4139942 4144318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0601 116 246 C2H2 Transcription Factor Family AT1G19790 49.624 1.40e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Glsi09g0601 DUF702 2.3e-24 No_clan