Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0597 ATGTTCAGCTGCTTGTGGCCATTACAGGCAATTACTTTTAACAGAACAGACATAGTATTATTGGTCAAACACAAAACACTGAAGAAGACTAATGAAGGAAGGAAAAAGGAAGCTTCTTGTTACCACACAGGAAGGTACCCCCTATTCGCATCAGATCGATCTCCTCCGTTTTGGAAAAGAATCGTACAGTCGTGGACAGCCTCCGGTAGTCTCGAGATGGCTGAGGCTGCGGTATCAACAGTTGTTGAAAAGTTTACAGAACTGCTACTCGAACAAGCAGCAAGTGCAGTTTCAGTGCTAAATGGGGTCCGCGACAAAGTAGAGAATCTAAAGAATGAATTGAGATGGATGCAATGCTTTTTGAGGGATGCCGATGCCAAACAAGAAGAAACCCAACTGGTTCGCATGTGGGTTTCTGAAATTAGAGATGTTGCTTTTGAAGCAGAAGAACTAATAGAAACCTATGTTTACAGGGCATCAAATCACAGCAGATGGAACAGGGTGTTTAGATCCTTGCATCTCTACGAGGTAGCCAGAAGAATCCAAAAAATTCGATCTAGGATACAGGATATATCTGATAGGCGTTCAACCTACGGTGTGGTCAGCTACAGCCGAGATGATAGACACGGGCAAACTAGTACCAACGAAAGGTTAAGGCACTGGAGACAGCCCTCGCCCAACTCTGAAGAGGAGTATGTCATTGAGCTCCAAGATGACTTAGGATTTGTGCTCACTCAACTACTTACAGTGGAGACAAGGCGTCGTGTGGTTTCTATATTTGGTATGGGAGGTTTGGGCAAAACCACCTTGGCCAAGAAATTGTATAATCATAGCAAAATTCATAACCATTTTGACTGTAGAGGTTGGGTCTACGTCTCTAAAGAGTACAGAAGAAGAGACATTTTGCAAGGAATTCTCAGGGATGCAGCTGCTCTCGGTAGAGATGAAATGGATAGATTGGAGAGATTACGGGAGGAAGAGTTGGTCAACATGCTGCACACTATCTTGGACGAGAAAAGGTATTTAGTGGTTCTTGATGATATTTGGAACATGGAGGTCTGGGATGGCCTAGAATCTGCATTTCCCAGGGGGAAGATGGGAAGTAAAGTAATGCTCACTACTAGAAACAGGGAAGTAGCTTTGCATGCAGATGCAGGTAGCAGCCCTCATCAACTACGGCCATTGACAGAAGATGAAAGCTTGAAATTGCTATGCAATAAAGCATTCCCCGGAATTAACAGCATCTCCCCAGAGTTGGAAAATCTTGCAAGGGATATTGTGGTAAAATGTGGTGGTTTGCCTTTGGCTGTGGTAGTAGTTGGAGGTTTACTATCAAGGAAACTCAAATCAACTGAGGAATGGATGCGAGTGGTTCAAAATATCAGTTGGCACTTGCTAAAAGAACAAGATAGAATAGAAGGGATTTTGGCCCTAAGCTACAACGACTTGCCTTCTCACTTAAAATCATGCTTCCTCTACTTAGGTCTTTTCCCAGAGGGTATGAACATTCAGACAAAAAAATTGATTCGCCTGTGGGTTGCAGAAGGTTTTTTACCACAAGAAGGTGAAGAAACGGCAGAAGGTGTTGCTGAAAAAAGCTTAAATGAGTTGATTGGCAGGTGTATGATTCAAGTGGGCACAGTGAGTTCGTTAGGCAGGGTTAAAACTATTCGCATCCATGATCTTCTCAAAGATCTTTCCGTCTCAAAAGCAAAAGAGGAATACTTCCTCAAAATTTATCTTGGCAGCATGATGGGCACATTAGCATCTCAGTTAGACAAATCCCGGCGGCATGCCATACATTCTTGCTATGACCGCTATAACTTCTCAAAACACACGGCCCATCATTCGCGTTCTCTCCTGTTCTTCAATAGAGAATATAATGCAGATACAGTGAGAAGAATCAGGTTTCATAACCTGCAGTACAACATGACTTTTCTGCTAGAAAAGAAATTGAATTTCATTTACAGGAAATTCAAGCTCCTCAGGGTTTTAGAGTTAGATGGTGTTCGGGTAGTTTGCCTGCCAAATACAATAGGGGACCTTATTCAATTAAGGTATCTAGGATTGCGGAAGACTAATCTAGAAGAAGAACTTCCACCGTCCATTGGAAACTTGCAGAACCTGCAGACGCTTGATTTAAGGTACTGTTGTTTTCTTAAGAGGATACCAAATGTAATTTGGAAGATGGTGAATTTGAGACATTTGCTTCTGTATACTCCATTTGATTCTCCAGATAGCTGGCATCTAAGAATGGACACATTAACTAATTTACAAAGCCTGCCGTATATAGAGGCTGGAAGCTGGATAGAAGACGGGGGTTTAGCCAAAATGAACAATCTTAGGCAACTGGGGATTTTTGAGTTATCTGGAAAAACGCTGAATTCAGTTCTTTCTACTGCACAAGGATTACAACACCTTCATTCACTGTCTCTATCTCTTCAATCTGAAGAGGAGGAGTTTCCAATCCTAATGCAGCTTTCACAGTGCACTCAGCTCCACAAGCTCTCTTTGAACGGGAAGATCAACAAACTACCAGACCCCCATGAATTCCCGCCAAACCTTATTAAACTCACTTTACATAATTCCCACCTACAGATGGAGTCTATTGCCAAACTTGAGAGGTTACCAAAACTTAAAATGCTTGTTTTGGGAAAAGGGGCATACAGTTGGCGGGAATTGACCTTCTCTGCTGAAGGATTTTCACAATTGCAAATTCTGCGGCTTAATCTTTTAAAACAATTGGAGGATTGGACAGTTGAGGAAAGGGGAATGCCAAGACTTGAACAGATAGTTATTAATCGCTGTGAGAAGCTGAAGAAGATCCCAGAAGGACTGAAGGCTGTTACTTCTCTCAAGGAAATAAAGATTATAGGAATGCCGGTAGAATTTGAACACAGACTACGAACTGAAGACTTGCTAGAGTTTCGAAATAGCCCTTCAATTGAATCAACGACGGACATTTTGGCAAATGGTAAGCTATATATTTACCATTGA 2997 0.4204 MFSCLWPLQAITFNRTDIVLLVKHKTLKKTNEGRKKEASCYHTGRYPLFASDRSPPFWKRIVQSWTASGSLEMAEAAVSTVVEKFTELLLEQAASAVSVLNGVRDKVENLKNELRWMQCFLRDADAKQEETQLVRMWVSEIRDVAFEAEELIETYVYRASNHSRWNRVFRSLHLYEVARRIQKIRSRIQDISDRRSTYGVVSYSRDDRHGQTSTNERLRHWRQPSPNSEEEYVIELQDDLGFVLTQLLTVETRRRVVSIFGMGGLGKTTLAKKLYNHSKIHNHFDCRGWVYVSKEYRRRDILQGILRDAAALGRDEMDRLERLREEELVNMLHTILDEKRYLVVLDDIWNMEVWDGLESAFPRGKMGSKVMLTTRNREVALHADAGSSPHQLRPLTEDESLKLLCNKAFPGINSISPELENLARDIVVKCGGLPLAVVVVGGLLSRKLKSTEEWMRVVQNISWHLLKEQDRIEGILALSYNDLPSHLKSCFLYLGLFPEGMNIQTKKLIRLWVAEGFLPQEGEETAEGVAEKSLNELIGRCMIQVGTVSSLGRVKTIRIHDLLKDLSVSKAKEEYFLKIYLGSMMGTLASQLDKSRRHAIHSCYDRYNFSKHTAHHSRSLLFFNREYNADTVRRIRFHNLQYNMTFLLEKKLNFIYRKFKLLRVLELDGVRVVCLPNTIGDLIQLRYLGLRKTNLEEELPPSIGNLQNLQTLDLRYCCFLKRIPNVIWKMVNLRHLLLYTPFDSPDSWHLRMDTLTNLQSLPYIEAGSWIEDGGLAKMNNLRQLGIFELSGKTLNSVLSTAQGLQHLHSLSLSLQSEEEEFPILMQLSQCTQLHKLSLNGKINKLPDPHEFPPNLIKLTLHNSHLQMESIAKLERLPKLKMLVLGKGAYSWRELTFSAEGFSQLQILRLNLLKQLEDWTVEERGMPRLEQIVINRCEKLKKIPEGLKAVTSLKEIKIIGMPVEFEHRLRTEDLLEFRNSPSIESTTDILANGKLYIYH 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0597 998 CDD RX-CC_like 74 193 IPR038005 -
Glsi09g0597 998 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 494 IPR027417 -
Glsi09g0597 998 Gene3D - 218 386 IPR027417 -
Glsi09g0597 998 FunFam Probable disease resistance protein At5g66910 394 479 - -
Glsi09g0597 998 FunFam Probable disease resistance protein At1g61300 216 387 - -
Glsi09g0597 998 Pfam NB-ARC domain 242 481 IPR002182 GO:0043531
Glsi09g0597 998 PANTHER DISEASE RESISTANCE PROTEIN RP 97 936 IPR044974 GO:0006952
Glsi09g0597 998 Pfam Rx N-terminal domain 77 165 IPR041118 -
Glsi09g0597 998 Gene3D - 480 570 IPR036388 -
Glsi09g0597 998 PRINTS Disease resistance protein signature 256 271 - -
Glsi09g0597 998 PRINTS Disease resistance protein signature 335 349 - -
Glsi09g0597 998 PRINTS Disease resistance protein signature 430 444 - -
Glsi09g0597 998 PRINTS Disease resistance protein signature 704 720 - -
Glsi09g0597 998 Gene3D - 394 479 IPR042197 -
Glsi09g0597 998 FunFam Probable disease resistance protein At1g63360 480 569 - -
Glsi09g0597 998 SUPERFAMILY L domain-like 560 968 - -
Glsi09g0597 998 Gene3D Ribonuclease Inhibitor 626 984 IPR032675 -
Glsi09g0597 998 Gene3D - 76 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0597 Glsi-ChrGlsi09 4119015 4122011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0597 255 566 WRKY Transcription Factor Family AT5G45050 25.697 9.47e-10 60.8