Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0588 ATGATATTTTCCTCCGGAGACATGCCTTCCCCATCCTCCATGTTCTCGGCTTATGCCTCCATGACTGCCTCTATTATGCTTTTGCGTTCATTGGCCAACGATCTCATCCCTCAGCCAATTCGAGGGTACCTCTTTAATGCCGTCCGCTGCTTTATGAAGCCTCGCTCCCCTTCTCTCACCCTTGTCATCGAAGAATCCAGCGGCATAGCCCGCAACCAAGTGTATGATGCTGCAGAGGTTTATTTGTCCACCAGAGTCAGTCCCCAGAATGAAAAGCTCAAGATCAGTAAGAGTCCAAAGGAGAAGAAATTGACCATTCGGCTAGAGAAGGGTGAAATGCTAGTGGATTGCTATGATGGGGTTGAGCTCAAATGGAGATTTATCTGTGCAGAATCCGAAAAGAATAACCCCAACGATAATAATATCTCTGTGAGATCGGAAAAGCGATATTTTGAGCTGATTTTCCATAAGAAGCACAAGGGAATGGTCTTGGACTCGTATCTGCCGTTCATTCTTGAAAAAGCCAAGGAGATGAAGGATGAGGAAAGGGCGTTGAAGATGCATACTCTCAACACTTCCTACTGTTATGGTGGGGTGAAATGGGATTCCATCAATCTGGAACACCCATCGACTTTCGAGACACTGGCCTTTGAGCCAGAGTTGAAGAATGCTGTGATAGAGGATCTAAATAGGTTCGTGAAGAGGAGGGAGTTCTACAAGAAAGTTGGGAGGGCATGGAAGCGTGGGTACTTGTTGTATGGCCCTCCCGGTACTGGCAAATCCAGCTTGATCGCAGCCATGGCTAATTACTTGAAGTTCGATATCTACGACCTCCAACTAGTTAACATAGTAAGAGATTCGGACCTGAGAAAGCTGCTGCTGGCAACTGCAAATAGGTCCATTCTTGTGATTGAAGACATTGATTGTAGCGTGGATCTGCCGGATCGTCGCCACGGAGAAGGACGTAAGCAAGCTGACGTACAGTTGACGTTGTCTGGATTACTGAACTTCATAGATGGGCTATGGTCAAGTTGTGGAGACGAGAGAATCATCATATTCACCACCAACCACAAGGAGAGGCTAGACCCAGCTCTGTTGCGGCCGGGGAGAATGGACATGCACATTCACATGTCCTATTGCTCCTACCATGGGTTCAAGCTTTTGGCCTCAAATTACTTGGGGATTTTCTCCGATCATCACCTGTTTGGAGAGATAGAAGAGCTAATAGAGGACACACAGATAACCCCCGCTCAAGTGGCAGAGGAGCTTATGAAGAGCGAGGACGCTGATGCTGCACTTGAAGGATTCGTGAAGCTGCTTAAGCGGAAAAAGATGGATGGCGATGTGTGCCAGAACGATGGTTCAGAGAAAGCACAAAGTCGGCAATCAAAAAGGCAGAAAGTGGGTTGTAAGAAGAAAAGGCCTGTGGGAATCATTAAGAGAAATGGTGCTGTCAATGGTACGAAAAGAAGGACAAGAAGAGGAAGTAGCCTGTAA 1497 0.4696 MIFSSGDMPSPSSMFSAYASMTASIMLLRSLANDLIPQPIRGYLFNAVRCFMKPRSPSLTLVIEESSGIARNQVYDAAEVYLSTRVSPQNEKLKISKSPKEKKLTIRLEKGEMLVDCYDGVELKWRFICAESEKNNPNDNNISVRSEKRYFELIFHKKHKGMVLDSYLPFILEKAKEMKDEERALKMHTLNTSYCYGGVKWDSINLEHPSTFETLAFEPELKNAVIEDLNRFVKRREFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLQLVNIVRDSDLRKLLLATANRSILVIEDIDCSVDLPDRRHGEGRKQADVQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSYHGFKLLASNYLGIFSDHHLFGEIEELIEDTQITPAQVAEELMKSEDADAALEGFVKLLKRKKMDGDVCQNDGSEKAQSRQSKRQKVGCKKKRPVGIIKRNGAVNGTKRRTRRGSSL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0588 498 MobiDBLite consensus disorder prediction 448 498 - -
Glsi09g0588 498 Gene3D - 376 447 - -
Glsi09g0588 498 CDD RecA-like_BCS1 225 377 - -
Glsi09g0588 498 PANTHER BCS1 AAA-TYPE ATPASE 16 445 - -
Glsi09g0588 498 Pfam ATPase family associated with various cellular activities (AAA) 251 378 IPR003959 GO:0005524|GO:0016887
Glsi09g0588 498 ProSitePatterns AAA-protein family signature. 349 367 IPR003960 GO:0005524|GO:0016887
Glsi09g0588 498 SMART AAA_5 246 381 IPR003593 GO:0016887
Glsi09g0588 498 Pfam Domain associated at C-terminal with AAA 36 128 IPR025753 -
Glsi09g0588 498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 428 IPR027417 -
Glsi09g0588 498 Gene3D - 200 375 IPR027417 -
Glsi09g0588 498 MobiDBLite consensus disorder prediction 464 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0588 Glsi-ChrGlsi09 4079830 4082202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0588 224 381 Calmodulin-binding Proteins AT3G56690 27.711 1.80e-11 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0588 09 4079830 4082202 Glsi09g0588 09 4079830 4082202 ECH