Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0570 ATGGCATCATCGTGGACACAGAGGCAAAACAAACTATTTGAAAGGGCTCTGGCTTTAAATGATAGGGAAACCCCTGATAGGTGGCAGAATATTGCCAGAGAAGTGGGAAAATCTGTAGAGGAGGTTAAAAGGCATTATGAGATCCTGAAAGAAGATGTCAAACGCATTGAGCATGGTCAAGTCCCATTCCCCCATTACAGTACAAACAGCAATAAAGCTTAA 222 0.4234 MASSWTQRQNKLFERALALNDRETPDRWQNIAREVGKSVEEVKRHYEILKEDVKRIEHGQVPFPHYSTNSNKA 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0570 73 Gene3D - 2 63 - -
Glsi09g0570 73 SMART sant 1 52 IPR001005 -
Glsi09g0570 73 CDD SANT 4 50 IPR001005 -
Glsi09g0570 73 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Glsi09g0570 73 FunFam Transcription factor SRM1 1 63 - -
Glsi09g0570 73 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Glsi09g0570 73 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 71 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0570 Glsi-ChrGlsi09 3961616 3961837 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g0223 01 1780966 1781827 Glsi09g0570 09 3961616 3961837 ECH
Glsi09g0570 09 3961616 3961837 Glsi09g0570 09 3961616 3961837 ECH