Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0540 ATGAGAGTTCCACAGGCCAACCATTCCCCCAACCCAAAACCCAGTATTAACCACAGCGCACCCCTAAACATTGCCCTCCATAACCCTACCAGTATCAATCCAAGCTTGTGCTACGAGCCCACCTCTGTTCTCGACCTCTGCCGGAGTCCCACCGATCACTCCGACTCGCTGACGTCCAAGCCAGAGGAGTCTCTGGAGCTGGACGAGCATGCGTTGCATAATATTCTGGATTGGGATTCCATTATGAAGGAGTTGGGTGTACATGAGGGCTCGGGTGCACCCGCTTTCAAGATTATTCCCCACCTCCCTCACTTCCCTCCTTCCCAGGAGCCACTATTGGATCACACTCCAGATTTTAATCTCCCAGACATTTACTCCAACCAAAATCTCGGCTATAACTTTAACACTTTGGATCCTTTGGTTCAGGACTTCAATCATAACGGATTTGATTTCATTGAAGTTCTTATTCGCGCAGCTGATTGCTTTGACTCCAACCAGCTACATCTGGCTCATCTCATACTGGAGCGCCTCAATCAACGCCTCAGATCTCCGGTGGGAAAACCCCTGCACAGAGCTGCCTTTTACTTCAAAGACGCTCTCCAGTCTCTTCTCTCCGGTTCCAACCGGACTCCAAGCGTTTCTTCCTTGTTTGACATTGTGCAAAGCATTAAAACCTTCAAGGCCTTTTCTGGAATCTCCCCAATCCCCATGTTCTCCATATTCACCACTAACCAAGCACTCCTCGAAGTCTTTCACGCCTCATCCTTTATGCACGTCATCGATTTCGACATCGGTCTCGGTATTCAGTACGCTTCTCTCATGAAGGAGATTGCCGAGAAGGCCGACTCATGTAAAATCAACTCGCCCGTTCTTCGAATCACCGCCTTGGTGCCCGATGAATATGCCGTTGAATGCAAATTAATCCGAGAAAACCTGAACCAGTTCGCTTATGAACTCAGAATCCGAGTCCAGGTCGAGTTCGTGCTGTTGCGAACGTTCGAGACGATGTTGTTTAAGGTCATCAAGTTCATGGACGGAGAGAAGACAGCAGTTCTATTATCTCCGACGATCTTCCGGCGTCTCAGTTCGACCAACAACATAGCTGCATTTTTAGCGGATGTTCGGAGGGTTTCGCCCAGTGTGGTGGTATTTGTAGACGGTGAAGGGTGGACGGAGGCAGCTGCAACCACGTCGTTTCGTCGGGGTGTAGTGAACAGCCTGGAATTCTACTCGATGATGTTAGAATCTTTGGATGCATCAATGGTGAGCGGAGGAGGGGATTGGGTGAGAAATATAGAGATGCTTCTGCTACGTCCGAAGATTATGGCAGCGGTAGAAGGGGCGGGAAGGTTGGTGTCGCCGTGGAGGGAGTTGTTTTACGGGGCGGGAATGAGGGCGGTGCAGTTAAGCCAGTTCGCGGATTTTCAAGCGGAGTGCTTGTTGGCCAAGGTACAGATCAGAGGGTTCCAGGTGGGAAAACGTCAGGCTGAGCTGGTGCTCTTCTGGCATGAGCGGCCCATGGTTGCCACGTCAGCATGGCGGTGTTAG 1548 0.5071 MRVPQANHSPNPKPSINHSAPLNIALHNPTSINPSLCYEPTSVLDLCRSPTDHSDSLTSKPEESLELDEHALHNILDWDSIMKELGVHEGSGAPAFKIIPHLPHFPPSQEPLLDHTPDFNLPDIYSNQNLGYNFNTLDPLVQDFNHNGFDFIEVLIRAADCFDSNQLHLAHLILERLNQRLRSPVGKPLHRAAFYFKDALQSLLSGSNRTPSVSSLFDIVQSIKTFKAFSGISPIPMFSIFTTNQALLEVFHASSFMHVIDFDIGLGIQYASLMKEIAEKADSCKINSPVLRITALVPDEYAVECKLIRENLNQFAYELRIRVQVEFVLLRTFETMLFKVIKFMDGEKTAVLLSPTIFRRLSSTNNIAAFLADVRRVSPSVVVFVDGEGWTEAAATTSFRRGVVNSLEFYSMMLESLDASMVSGGGDWVRNIEMLLLRPKIMAAVEGAGRLVSPWRELFYGAGMRAVQLSQFADFQAECLLAKVQIRGFQVGKRQAELVLFWHERPMVATSAWRC 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0540 515 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 129 509 IPR005202 -
Glsi09g0540 515 MobiDBLite consensus disorder prediction 1 21 - -
Glsi09g0540 515 ProSiteProfiles GRAS family profile. 142 514 IPR005202 -
Glsi09g0540 515 Pfam GRAS domain family 152 514 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0540 Glsi-ChrGlsi09 3737135 3738682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0540 65 514 GRAS Transcription Factor Family AT4G36710 53.430 6.89e-163 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi09g0540 GRAS 1.5e-83 CL0063