Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0539 ATGGGGACAAAGGAACAAAGCACAACTAAACCTTCTAAGCCGTCTTCTTCAGCTCAGGATATACCAATGACACCTTCATATCCTGATTGGTCAAGCTCTATGCAGGCTTACTATGCTCCTGGAGCCACTCCCCCTCCTATTTTTGCCTCAGCTATTGCTTCCCCAACACCCCACCCATATCTGTGGGGGAACCAGCATCCTCTGATTACGCCATATGGGACTCCAGTTCCATACTCAACTATTTATCCTCCTCCGAGTGTCTATGGTCATCCTAGCATGGCAACGAAAAGTATAGAGTTGGAAGGGAAGGGAGCTGATGGAATAGACCGGGTTTCAGCCAAAAAATTGAAGGGAACTTCTGCAAATACAGGTTCCAAGGCAGGAGAGAGTGGAAAGTCAGGCTCAGGATCAGGAAATGATGGAATCTCACAAAGTGCTGATAGTGGTTCAGAGGGTTCATCGGATGCTAGTGATGAGAATACTAACCGACAGGAATCAACTAGAAACAAGAAAGGAAGTTTTGACCAGGTTCTTGTTCATGGAGCCAATACACAGAACAATTATGCTGGTACCATTTCTCAATCTTCTGTGCCTGGAATGGACTTAAGGAATGCATCTTCTGCTGGTTCAGGAGATGTAAAAATGAGACATAACCAACATGGTGCCTCAGCAGCAGTTGATGAACGTGAACTGAAAAGACAGAAGAGGAAGCAGTCTAACCGAGAGTCAGCTAGGAGGTCAAGACTACGCAAACAGGAAGAGTGTGAAGAGTTACGGAAGAGGGTGGAGACGCTTGGAAGTGAGAACCAAACTCTAAGAGAAGAGCTACAGAGACTTTCTGAGGAATGCAACAACCTTACTTCTGAAAACAGTTGCATCAAGGAAGAGTTGGAACGGTTGTGTGGAGCAGATTCAGTTGCTAATCTGGAATAG 933 0.4566 MGTKEQSTTKPSKPSSSAQDIPMTPSYPDWSSSMQAYYAPGATPPPIFASAIASPTPHPYLWGNQHPLITPYGTPVPYSTIYPPPSVYGHPSMATKSIELEGKGADGIDRVSAKKLKGTSANTGSKAGESGKSGSGSGNDGISQSADSGSEGSSDASDENTNRQESTRNKKGSFDQVLVHGANTQNNYAGTISQSSVPGMDLRNASSAGSGDVKMRHNQHGASAAVDERELKRQKRKQSNRESARRSRLRKQEECEELRKRVETLGSENQTLREELQRLSEECNNLTSENSCIKEELERLCGADSVANLE 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0539 310 Pfam G-box binding protein MFMR 2 93 IPR012900 -
Glsi09g0539 310 SUPERFAMILY Leucine zipper domain 231 287 IPR046347 GO:0003700|GO:0006355
Glsi09g0539 310 MobiDBLite consensus disorder prediction 1 27 - -
Glsi09g0539 310 MobiDBLite consensus disorder prediction 109 256 - -
Glsi09g0539 310 Gene3D - 231 286 - -
Glsi09g0539 310 MobiDBLite consensus disorder prediction 221 237 - -
Glsi09g0539 310 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 235 250 IPR004827 GO:0003700|GO:0006355
Glsi09g0539 310 MobiDBLite consensus disorder prediction 178 203 - -
Glsi09g0539 310 CDD bZIP_plant_GBF1 233 284 IPR045314 GO:0003700|GO:0006355
Glsi09g0539 310 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 230 293 IPR004827 GO:0003700|GO:0006355
Glsi09g0539 310 Coils Coil 241 296 - -
Glsi09g0539 310 MobiDBLite consensus disorder prediction 116 160 - -
Glsi09g0539 310 SMART brlzneu 228 292 IPR004827 GO:0003700|GO:0006355
Glsi09g0539 310 FunFam BZIP transcription factor 230 281 - -
Glsi09g0539 310 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 301 IPR044827 GO:0003700|GO:0006355|GO:0043565
Glsi09g0539 310 Pfam bZIP transcription factor 228 290 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0539 Glsi-ChrGlsi09 3734248 3736409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0539 1 310 bZIP Transcription Factor Family AT4G36730 51.923 7.88e-92 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi09g0539 MFMR 1.4e-26 No_clan