Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0515 ATGGAAGTGCTTCCTTGTCCTGGTGTTAAACATTCTGGGGACTCTGATTGCCCTCAGCAGAGTTCAGGAACAACTTTTGTATACCAGGGAGAATCTATTTGCCCGGAAAATGGTGAACAAGATATATTGGAAGGTGGTCAACTGAATGACTCATTACTTAAAATAGAAGGGCCTCAGATTGCAAGTCAAGGTGATGATCAAGAGACAGTTGGTGAATTGTCGACTAATTCAGATTGCCAACGTTGTGGAACTGCATTTGGTGACTGTCAAGTGGAAGACCAAAAGGAATCTTGCGGTTTTCATGATTTTGAAGATGATGAGATAAATGAACTTTGCTTCTTGGGGAACTCCCTTCCAATTGTGGATATGCTTGAAAGTGAATCACCAAACAATTGTAGGGAAGGAGAATCGTCACTTTCTGAACCCACTTGGCTAACGGGGGATGAATCTGTGGCCTTGTGGGTCAAGTGGAGAGGAAAGTGGCAGGCTGGCATCAGATGTGCAAGGGCTGACTGTCCATTGGCAACTTTGAAAGCAAAACCAACTCATGACCGGAAAAAATATTATGTGATATTTTTTCCTCACACACGAAATTATTCTTGGGCTGACATGCTACTTGTTCGTTCGATCAATGAGTTTCCCCAGCCTATTGCATATGAGACCCATCAGGTAGGATTGAAAATGGTAAAAGATTTGACTGGTGCACGGCGGTTTATAATGCAAAAGCTAGTTGTTGGCATGCTGAACATCATTGATCAATTCCATTTGAATGCATTAGTAGATAGTGCTCGTGATGTGATGGTCTGGAAGGAGTTTGCTTTGGAGGCTTCCTGTTCTAATGGTTATTCTGATCTTGGAAGAATGCTTCTAAAGCTGAATAATAGCATACTGCAGCGTTACAGAAATGCTAAATGGTTACAGCATTCTTTTCACTCTTGGGTTGAACGTTGCCAAAATGCAAATACTGCTGAATCAGTAGAGCTGCTGAAGGAGGAATTGTTTAATTCTATTTTGTGGAATGATGTCAACACTCTCTGGGATGCACCAGTGCAAGCAACATTAGGTTCTGAGTGGAAAACCTGGAAGCATGAAGTAATGAAATGGTTTTTCACATCTCCTTCCTTATCCTTGTGCAAAGATATACAGCAGCAGACCTCTGATGGTTCCTTCCAGGCAAGCCTTCAGTTTTGTAGAAAGAGGCCCAAGCTTGAAGTTCGTCGTGCAGAAACCCATGCTTCACAAGTGGAAAACAAGGGTTCAGATCAATCTATAACTCTTGAAACTGACCCAGCCTTCTTTAATAATCAGGACACATTAAGTACATCAGCAGCTGAAACATGTAAACAGCAAGACATTAGGGAAGTACCTATGGCAACTGATTCACCCAGTAATTTGTCTAATGAATGGAATGAAATTGTAGTTGAGTCTGCAGGTTCTAAAGTGTTGCATACCAAGGGCATGGAGTTAACACCTATGAATGAAATGGTTGGTACAAAATCTGTTGAACCTGGTAATAAGAATCGACAATGCATGGCTTATATTGAAGCCAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTATATTGTTGTGTGCATTTTTCCTCTCGATTTTTAAGCAGAGCAGAAAGACCTGTTTCTGTTGAGACTCCAATGTGTGAAGGTACAACTGTTCTTGGTACTAGATGTAAGCACCGGGCAATACCTGGCTCTTTATTCTGTAAGAAACACCGGCCTCATGGTGAAACAGATCACACCTCAAACTTACCCCAGAATACATTAAAGAGGAAACATGAAGAAAATTATACTGTTTCTGAGAGCATGTTGGCATTGGTAGATGTTGAAAGTCCCTGGCCGGTGGATCCAGTGTCAGTCGTGGATGGTGATGCCCTTCATGGGAGAACTAACTTAAATGGGAAGCCCATGGATTCTGGAAATGATCATAATGCAATGGAGGCACTTCAATGTATAGGCTCACCTCCATATGATAATATGAACCCTTGTTTGGAACCTCCAAAACGGTATTTCTTGTACTGTGAAAATCACCTTCCAAGCTGGCTTAAACGTGCTAGAAATGGAAAAGATAGGATAATTTCAAAAGAAATATTTGCTGAGCTGTTGAGGGACTGCTTCTCACCGGAGCAAAAAGCACATCTACATAAAGCATGTGTGCTTTTTTACAGGCTATTCAAAAGCATTTTATCCTTAAGAAACCCAGTTCCTAAAGAAGTTCAATTCCAGTGGGCTTTGACTGAAGCTTCTAAAGAGGTTAGTGTTGGAAAATTATTTACAAAGTTGGTTCATTGTGAAAAGGAGAGAATCAAATCACTTTGGGGATTTGATGATGACAAGGAGGTATCCTCACTTATGGAAGAATCACCTCTCTTGCCTTCAGCTGTTAATGATATTTTTTATAATGAAAATGTGATTAAGTGCAAGATATGCTCTGCAAAATTTCCTGATGATCAAGCACTTGGCAGCCATTGGATGGACAATCATAAAAAGGAAGCACAGTGTCTTTTTAGAGGTTATGCATGCGCCATTTGTCTAGATTCTTTTACAAACAAGAAAATCTTGGAAACCCATGTCCAGGAGAGACATCATGTGCAGTTCGTTGAACAGTGCATGCTTTTACAATGCATTCCATGTGGGAGCCATTTTGGAAATACTGACCAGTTATGGCTGCATGTTCTATCAGTTCATCCTTTTAATTTCAGACCATCAAAAGCTCCTGAGCAGCAAACTCTGACTTTGTCTACTGGCGAGGATTCTCCAGTGAAACTTGAGAAGGGGAATTCAGCTTCTTTGGAGAATAATTCTAAGAATCCATTTGGCTTGCGGAAATTTGTTTGCAGGTTTTGTGGGTTGAAGTTTGACTTACTACCCGACCTTGGTCGCCATCATCAAGCTGCTCATATGGGGCCTAATATCGTGAGCAGCCGCCCCTCAAAGAGGGGAGTTCGTTACTATGCATATAGATTAAAATCTGGCAGGCTTAGCCGTCCTAGATTTAAGGGTTTGGCAGCAGTGTCATATAGGATCAGAAGTAGGGCCAATGCTAATCTAAAGAGATGCATTCAGGCAACAAAATCACACGGCATGGGGGGAATAACTATACAACCTCATGTAACGGAGACAACAAATATTGATAGACTGGCTGAATATCAATGCTCAGCAGTTGCAAAGATTTTGTTTTCTGAAATTCTGAATACTAAACCTCGGCCTAATAATCTTGATATTTTGTCAATTGCTCACTCTGCTTGCTGCAAAGCTAGTCTTAAAACTTTACTGGATGAGAAATATGGAGTTTTGCCTGAAAAACTGTATTTGAAGGCAGCAAAACTTTGCAGTGAGCATACCATTCTAGTGAACTGGCACCAAGAGGGGTTTGTTTGTCCTAAAGGCTGCAAGTTGTTGAAGGACCAGTCATTTCTCTCTCCCTTAGCATCTCTTACCAATGGTTTTGTAAAAAAAAAATCTGTAAAAGTATCATATGCTACAAGTGATGAGTGGGATGTGGATGAGTCTCACTGTATCATCGATTCACGCCATTTAAAATCAGTTTCCTTGGAAAAGGCAGTTATCTTATGTGATGACATAAGCTTTGGGAAGGAATCAGTTCCAGTGATTTGTGTAGTAGATCAAGAACTTTTGAATTCTCTTCATATGCATGGTTCCAATTTTCGAGATATAAATTTCTCTATGCCTTGGGAGAGCTTTACCTACGTCACAAGGCCAATGCTTGATCAATCCCTTAGTCTTGATGCAGAGAGTATGCAATTGGGATGCGCCTGCTCAAACTCTACTTGCTCTCCTGAAACATGTGATCACGTGTACCTTTTTGATAATGACTATGATGATGCAAAGGATATTTTTGGGAAATCACTACGTGCCAGGTTCCCATATGATGAGAATGGCAGAATAATTTTGGAGGAAGGTTACCTTGTATATGAATGTAACCATATGTGCAGATGTAACGAAACCTGCTCTAATAGAATTTTGCAGAATGGAGTGCGAGTTAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGTTGGGCTGTAAGGGCTGGTGAAGCTATCCTGCGTGGCACATTTGTGTGCGAATACATTGGAGAGGTTTTAGATGAGCAGGAGGCACACAACAGGCATAAGAGATATGGCAAAGAAGGTTGCAGTTATTTCTATGACGTTGGCACTCATGTCAATGATATGAGCAGATTGACTGAAGGACAGGTTCGATATGTAATTGATGCTACTAGACACGGAAATGTCTCAAGGTTCATTAATCACAGCTGCTCGCCCAATCTTGTAAATCACCAAGTTCTTGTAGAGAGCATGGATTGTGAGCGTGCACATATTGGTCTTTATGCAAGCCGAGATATTGCTTTGGGTGAAGAACTGACATGCATTTATCGCTATGAGCTTGTGCCTGAAGAAGGATGTCCTTGCCTCTGTGGATCTTTGAAGTGTCGGGGACGCCTTTACTAG 4494 0.4114 MEVLPCPGVKHSGDSDCPQQSSGTTFVYQGESICPENGEQDILEGGQLNDSLLKIEGPQIASQGDDQETVGELSTNSDCQRCGTAFGDCQVEDQKESCGFHDFEDDEINELCFLGNSLPIVDMLESESPNNCREGESSLSEPTWLTGDESVALWVKWRGKWQAGIRCARADCPLATLKAKPTHDRKKYYVIFFPHTRNYSWADMLLVRSINEFPQPIAYETHQVGLKMVKDLTGARRFIMQKLVVGMLNIIDQFHLNALVDSARDVMVWKEFALEASCSNGYSDLGRMLLKLNNSILQRYRNAKWLQHSFHSWVERCQNANTAESVELLKEELFNSILWNDVNTLWDAPVQATLGSEWKTWKHEVMKWFFTSPSLSLCKDIQQQTSDGSFQASLQFCRKRPKLEVRRAETHASQVENKGSDQSITLETDPAFFNNQDTLSTSAAETCKQQDIREVPMATDSPSNLSNEWNEIVVESAGSKVLHTKGMELTPMNEMVGTKSVEPGNKNRQCMAYIEAKGRQCVRWANDGDVYCCVHFSSRFLSRAERPVSVETPMCEGTTVLGTRCKHRAIPGSLFCKKHRPHGETDHTSNLPQNTLKRKHEENYTVSESMLALVDVESPWPVDPVSVVDGDALHGRTNLNGKPMDSGNDHNAMEALQCIGSPPYDNMNPCLEPPKRYFLYCENHLPSWLKRARNGKDRIISKEIFAELLRDCFSPEQKAHLHKACVLFYRLFKSILSLRNPVPKEVQFQWALTEASKEVSVGKLFTKLVHCEKERIKSLWGFDDDKEVSSLMEESPLLPSAVNDIFYNENVIKCKICSAKFPDDQALGSHWMDNHKKEAQCLFRGYACAICLDSFTNKKILETHVQERHHVQFVEQCMLLQCIPCGSHFGNTDQLWLHVLSVHPFNFRPSKAPEQQTLTLSTGEDSPVKLEKGNSASLENNSKNPFGLRKFVCRFCGLKFDLLPDLGRHHQAAHMGPNIVSSRPSKRGVRYYAYRLKSGRLSRPRFKGLAAVSYRIRSRANANLKRCIQATKSHGMGGITIQPHVTETTNIDRLAEYQCSAVAKILFSEILNTKPRPNNLDILSIAHSACCKASLKTLLDEKYGVLPEKLYLKAAKLCSEHTILVNWHQEGFVCPKGCKLLKDQSFLSPLASLTNGFVKKKSVKVSYATSDEWDVDESHCIIDSRHLKSVSLEKAVILCDDISFGKESVPVICVVDQELLNSLHMHGSNFRDINFSMPWESFTYVTRPMLDQSLSLDAESMQLGCACSNSTCSPETCDHVYLFDNDYDDAKDIFGKSLRARFPYDENGRIILEEGYLVYECNHMCRCNETCSNRILQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLDEQEAHNRHKRYGKEGCSYFYDVGTHVNDMSRLTEGQVRYVIDATRHGNVSRFINHSCSPNLVNHQVLVESMDCERAHIGLYASRDIALGEELTCIYRYELVPEEGCPCLCGSLKCRGRLY 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0515 1497 ProSitePatterns Zinc finger C2H2 type domain signature. 814 835 IPR013087 -
Glsi09g0515 1497 Pfam Zinc finger C2H2-type, 3 repeats 848 975 IPR040689 -
Glsi09g0515 1497 SMART preset_2 1199 1326 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Glsi09g0515 1497 ProSitePatterns Zinc finger C2H2 type domain signature. 953 974 IPR013087 -
Glsi09g0515 1497 MobiDBLite consensus disorder prediction 913 936 - -
Glsi09g0515 1497 Gene3D Classic Zinc Finger 812 869 - -
Glsi09g0515 1497 SUPERFAMILY SET domain 1191 1487 IPR046341 -
Glsi09g0515 1497 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1497 - -
Glsi09g0515 1497 ProSiteProfiles SET domain profile. 1342 1474 IPR001214 GO:0005515
Glsi09g0515 1497 ProSiteProfiles Pre-SET domain profile. 1263 1339 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Glsi09g0515 1497 ProSiteProfiles Zinc finger C2H2 type domain profile. 846 869 IPR013087 -
Glsi09g0515 1497 SMART c2h2final6 846 869 IPR013087 -
Glsi09g0515 1497 SMART c2h2final6 951 974 IPR013087 -
Glsi09g0515 1497 SMART c2h2final6 880 903 IPR013087 -
Glsi09g0515 1497 SMART c2h2final6 812 835 IPR013087 -
Glsi09g0515 1497 MobiDBLite consensus disorder prediction 1 21 - -
Glsi09g0515 1497 Gene3D SET domain 1179 1478 IPR046341 -
Glsi09g0515 1497 SMART set_7 1342 1480 IPR001214 GO:0005515
Glsi09g0515 1497 Pfam Pre-SET motif 1202 1334 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Glsi09g0515 1497 ProSiteProfiles Zinc finger C2H2 type domain profile. 951 979 IPR013087 -
Glsi09g0515 1497 ProSiteProfiles Post-SET domain profile. 1481 1497 IPR003616 -
Glsi09g0515 1497 ProSitePatterns Zinc finger C2H2 type domain signature. 882 903 IPR013087 -
Glsi09g0515 1497 Pfam SET domain 1353 1473 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0515 Glsi-ChrGlsi09 3548845 3560125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0515 134 1496 C2H2 Transcription Factor Family AT2G23740 51.876 0.0 1377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Glsi09g0515 Pre-SET 3.1e-15 No_clan