LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi09g0505	ATGCGTCCAGAAATGTCGTATTACCAGAAAAAAATTGCTATTGCGCTCGCTGTCTTCATGGTCTACACAGCAAGAGCAGAAAAGTCGACCACCTGCCAGCGCAGGTGCGGAGGATATTCGGTGCAGTACCCTTTCGGGTTCTCTGGAAGTTGCGAGATCAAATTAAACTGTAGCACAAGTCACCACATCCAAATTGGCAAATTAGAGGTCCAGAAAGTAACCTCTAGCAGTATCTTCATCAATCTTCCTGCGAAATGCAATCGTAGTATGCAATCCATCAACCCCCTTTTCAGTAAAAACTTTGCTCCCACAAGGAACAATAGCCTTCTCGTGCAAAGTTGCTCATCTGCGCTTGGCGGCTGCGTCATACCCACCACCAGTTTTATGGGCAATCAGTTTAAGTTGGACAGTTGCGATAAAAGTAGTGATAATATCAGTTGCTTGACGCAGTTCCAAACGCAGAAAGCTTTGGATGTTCTGACATACACGGATGTGTCTCGAACTGGGTGCAAGTTCCTGTTCTCAGCGATTGCAGTTGACCAGAGGAAAGACCCAGCGGTTTCGCTCCAGCTTCAGGTGCTTGAGTTGGGGTGGTGGCTTGAAGGGCCATGCCAATGCTCTCACGTTGGAAACTGTACAAAGGTCCATCTCTCTGACGGGAAGCATGGGTTCCGATGCGAATGCCCTGAAGGTTACCGTGGAGATGGGTTCAAGGACGGCACCGGTTGCCGGAGAGTTTCTCATTGCACTGCTGCAACACTCGTGTCTGGCGGATGTGGAAAAGCAGCTAAAATCGGTGTTCTTGTTGGCGGGATTATTGCTGTAGCTTCTTTCATGGCTGCTCTGTGTCTTCCATGTTACTTTGCACGACGCCGTTCCACTTGTTTGAGAAAACAAATGACTGTAAAGCGCCTATTACTTGAAGCTGCAGGCAACTCTAGTGTTCCTTTCTATCCTTACAAAGAAATAGAAAGAGCCACTAACTTTTTCTCTGACGAACAGAGGCTGGGAACTGGGGCTTTTGGTACAGTATATGCAGGAAAACTACACGATGATGAATGGGTTGCAATAAAAAAGATAAAGTACAGAGACACCAACAGCGTTGACCAAGTCATGAATGAGATCAAGCTTCTTTCTTCTGTGAGTCACCAAAATTTAGTTCGCCTCTTGGGTTGCTGCATAGAGGAGGGCGAGCAGATACTTGTTTATGAGTTTATGCCCAATGGAACACTATCTCAACATTTACTGAGAGAGAGGGGTACAGGACTTCCATGGACAATACGGCTCACCATTGCTACTGAAACCGCTAATGCTGTAGCATATCTCCATTCTGCCATTGATCCCCCAATATATCACAGAGACATAAAATCCAGTAATATACTCTTGGATTACAACTTCAAATCAAAAGTAGCAGATTTTGGGCTTTCTAGGCTTGGCATGACAGAAACATCACATATTTCAACTGCCCCACAAGGGACCCCAGGCTACGTAGACCCTCAATACCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTCTATAGTTTTGGAGTGGTTTTGGTAGAGATAATAACTGCCCTGAAAGTGGTTGATTTTGCTCGACCTCTGAGTGAGGTTAATTTGGCTGCACTTGCTGTTGATAGGATCAGAAAGGGCTGTGTAGATGAGATCATAGATCCTTTCGTCGAGCCCCACAGGGATGCTTGGACACTTCATTCCGTTAACAAGGTGGCTGAGCTTGCGTTTAGATGCCTTGCTTTTCATAGTGATATGAGGCCTACTATGATGGAAGTGGCAGAGGAGCTAGAACGCATCAGACGCAGTGGATGGGCAACAATGGACGAAACTATATGCATGGCATCATCAGTCGGGTCCTCATGTTCATCACCTCGAAATGGAAGTGAGAAGTCATTAGGTCGTATTAAGGTTAAGAAAGCCGAACAAGGGAGTCACAGATCAACTGTTCCACCGAGGACAGATAATTTTCAACATTCTATGGAAGAGGCGAAGGACAGCTCCCCTGTATCAGTGCATGATCCTTGGTTAAGTGGACATAGCTCCCCTTCAACAAACAGCTTGCTGGGAAATGTAGTTCAGTGA	2100	0.459	MRPEMSYYQKKIAIALAVFMVYTARAEKSTTCQRRCGGYSVQYPFGFSGSCEIKLNCSTSHHIQIGKLEVQKVTSSSIFINLPAKCNRSMQSINPLFSKNFAPTRNNSLLVQSCSSALGGCVIPTTSFMGNQFKLDSCDKSSDNISCLTQFQTQKALDVLTYTDVSRTGCKFLFSAIAVDQRKDPAVSLQLQVLELGWWLEGPCQCSHVGNCTKVHLSDGKHGFRCECPEGYRGDGFKDGTGCRRVSHCTAATLVSGGCGKAAKIGVLVGGIIAVASFMAALCLPCYFARRRSTCLRKQMTVKRLLLEAAGNSSVPFYPYKEIERATNFFSDEQRLGTGAFGTVYAGKLHDDEWVAIKKIKYRDTNSVDQVMNEIKLLSSVSHQNLVRLLGCCIEEGEQILVYEFMPNGTLSQHLLRERGTGLPWTIRLTIATETANAVAYLHSAIDPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFARPLSEVNLAALAVDRIRKGCVDEIIDPFVEPHRDAWTLHSVNKVAELAFRCLAFHSDMRPTMMEVAEELERIRRSGWATMDETICMASSVGSSCSSPRNGSEKSLGRIKVKKAEQGSHRSTVPPRTDNFQHSMEEAKDSSPVSVHDPWLSGHSSPSTNSLLGNVVQ	699

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi09g0505	699	MobiDBLite	consensus disorder prediction	679	699	-	-
	Glsi09g0505	699	SMART	serkin_6	330	611	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi09g0505	699	FunFam	Wall-associated receptor kinase-like 14	297	405	-	-
	Glsi09g0505	699	MobiDBLite	consensus disorder prediction	624	699	-	-
	Glsi09g0505	699	FunFam	Wall-associated receptor kinase-like 20	406	615	-	-
	Glsi09g0505	699	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	450	462	IPR008271	GO:0004672\|GO:0006468
	Glsi09g0505	699	ProSitePatterns	Protein kinases ATP-binding region signature.	336	359	IPR017441	GO:0005524
	Glsi09g0505	699	Gene3D	Transferase(Phosphotransferase) domain 1	406	621	-	-
	Glsi09g0505	699	SUPERFAMILY	Protein kinase-like (PK-like)	311	603	IPR011009	-
	Glsi09g0505	699	Pfam	Protein tyrosine and serine/threonine kinase	333	602	IPR001245	GO:0004672\|GO:0006468
	Glsi09g0505	699	PANTHER	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4	18	682	IPR044652	GO:0004672
	Glsi09g0505	699	Gene3D	Phosphorylase Kinase; domain 1	291	405	-	-
	Glsi09g0505	699	ProSiteProfiles	Protein kinase domain profile.	330	605	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi09g0505	699	CDD	EGF	203	236	-	-
	Glsi09g0505	699	MobiDBLite	consensus disorder prediction	637	651	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi09g0505	Glsi-ChrGlsi09	3505894	3509682	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi09g0505	12	697	Receptor kinase-like Gene Family	AT2G23450	55.331	0.0	747

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK_LRK10L-1	Glsi09g0505		PK_Tyr_Ser-Thr	2.6e-44	CL0016