Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0484 ATGGAGCGTACCTCTAATAAGCATCCTTTTCTTTTCTTGTTTTGGCTAGTGTTCTTTAGTCCTCTAGCATGGTGTCAGCTTAATTATAGGTTCTATGATGTAACTTGTCCAAACCTTACTAATATTGTTCGATACAATGTGTGGTCAGCTATGGCCAATGACACCAGAATTGCAGCTTCTCTGTTGCGTCTTCACTTCCATGACTGTTTCGTTAATGGATGTGATGGGTCTGTGCTACTTGATGATAGCAGCACATTTAAGGGGGAAAAAAATGCACTGCCTAATCAAAATTCAATCAGAGGATTTGAGGTCATCGACGTCATCAAGTCTGCTCTAGAGAAGGCATGTCCATCTATAGTGTCGTGTGCTGATATACTAACTCTAGCAGCAAGAGAAGCTGTTTATCTTAGTGGAGGCCCATTTTGGTCTGTACCTCTTGGTCGTCGAGATGGCACAACAGCGAGCGAGAGTGAGGCCAATGAGTTGCCATCACCTTTTGAGCCCCTAGAAAACATCACTGCCAAGTTCATTAAAAAGGGTCTTGAAATCAACGATGTGGCGGTGCTCTCAGGCGCACACACCTTTGGCTTTGCGCAGTGCTTTACATTCAAGCCAAGGCTCTTTAACTTTGGTGGCTCTGCTGGGAAATCTGATCCAACACTTGATGCTTCACTTCTACAAAGTTTGCAGAAACTATGCCCCAATCAAGATGATTCTGACACCAAATTGGCTCCTTTGGATCCAGTGACAACCAACAGATTTGATAACATGTATTACAGAAACCTGGTGAACAACTCAGGGTTACTTCAGTCAGATGAGGCTCTGTTGGGTGACAACAGGACGGCTTCATTGGTACTCAACTACAGCAAGTATCCTTTTCTCTTCTTCATGGACTTTGCGGCATCGATTGAGAAGATGGGCCGCATAGGTGTACTGACAGGGCAACAGGGGGAGATAAGGAAAAACTGTAGGGCGGTGAACTAG 984 0.4461 MERTSNKHPFLFLFWLVFFSPLAWCQLNYRFYDVTCPNLTNIVRYNVWSAMANDTRIAASLLRLHFHDCFVNGCDGSVLLDDSSTFKGEKNALPNQNSIRGFEVIDVIKSALEKACPSIVSCADILTLAAREAVYLSGGPFWSVPLGRRDGTTASESEANELPSPFEPLENITAKFIKKGLEINDVAVLSGAHTFGFAQCFTFKPRLFNFGGSAGKSDPTLDASLLQSLQKLCPNQDDSDTKLAPLDPVTTNRFDNMYYRNLVNNSGLLQSDEALLGDNRTASLVLNYSKYPFLFFMDFAASIEKMGRIGVLTGQQGEIRKNCRAVN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0484 327 CDD secretory_peroxidase 26 326 IPR033905 GO:0004601|GO:0042744
Glsi09g0484 327 Gene3D Peroxidase, domain 2 163 306 - -
Glsi09g0484 327 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PANTHER PEROXIDASE 72-RELATED 25 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Glsi09g0484 327 ProSiteProfiles Plant heme peroxidase family profile. 26 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Glsi09g0484 327 Gene3D - 30 327 - -
Glsi09g0484 327 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 FunFam Peroxidase 163 306 - -
Glsi09g0484 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0484 327 FunFam Peroxidase 30 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0484 Glsi-ChrGlsi09 3342549 3343913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0484 26 323 Peroxidase AT1G49570 65.116 7.96e-138 393