Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0451 ATGCCTGATCATTCCACTGGGACAATGAACGACCAGCTCTCGAGACCGACCTCTATCTTCGGACTCCGCTTGTGGGTTGTTCTTGGGGTATGTGTTGGAGTTGCCATTGTGCTCCTTCTCTTCCTCATCTCTATCTGGCTAGCTTCGAAGCGCTCCAAGAGTAAGCCCTCTCGTAGACCCTTAATCCCAGTTGATTCCAAAGAGATCCAAGAGATTAGAGTGGACCGTGCCCCTTCCCAAGATTCCAAACCAAATGGAACTCATATCCAATCCGACCCATTCCCTGAACAGGACCCCGTTCCGGTAATCGACCGGCAAGCTTTGCTACCACCATCAGAAGACGAGAACCCGTTGGGATACAACAAAATTCAATTTGAGATTGGGAAAAATCATCGAATTTCATACCCTGAACGCGCCTTTGCTAGGTCTTCTCCACACACGAGTGGGGAGGCTCGACCTGCCGATCAGGTGCCTACGGTGATACCTGAAGTTTCACATTTGGGTTGGGGCCACTGGTATACTCTGAGGGAGCTTGAGGATTCGACGAATGGGTTTGCCGACGAGAATGTTATCGGTGAAGGCGGCTATGGAATTGTTTACCATGGTATATTGAAGGACAAAACTCATGTTGCTATTAAGAATTTGCTCAATAACAGGGGACAAGCCGAAAAAGAGTTTAAGGTCGAAGTGGAAGCTATAGGACGAGTTCGGCATAAGAATTTAGTGAGGTTGCTCGGGTATTGTGCTGAAGGAGCTCACAGAATGCTTGTGTATGAATACGTTGACAATGGGAACCTAGAGCAGTGGCTGCATGGAGATGTTGGGCCTTGCAGTCCTCTCACTTGGGAAATTCGAATGAACATTATACTGGGAACAGCAAAAGGGTTAACCTACCTTCACGAGGGGCTGGAACCAAAAGTTGTTCACCGTGATATTAAATCAAGCAACATTTTGCTTGACAAGCAGTGGAATTCAAAGGTGTCAGACTTTGGCCTTGCCAAACTCCTTGGCTCTGAGAGCAGCTACATCACAACCCGTGTTATGGGTACATTTGGATATGTAGCTCCTGAATATGCAAGTACTGGCATGTTGAATGAACGGAGTGATGTGTATAGTTTTGGAATTCTTATTATGGAAGTAATCACTGGCAGAAACCCAGTTGATTATAGTCGGCCTCCAGAGGAGATGAATTTAGTTGACTGGCTCAAGAAAATGGTAAGTAACAGGAATGCAGAGGGAGTTCTGGATCCCAAGCTCACTGAGAAACCAACTTCAAGGGCACTAAAGCGAGCGCTTCTTGTAGCATTACGCTGCACAGACCCTAATGCACAAAAGCGGCCTAAAATGGGGCATATCATACACATGCTTGAATCTGAAGATTCCCCTTGCAAAGAGGATCGTAGAGTTAGGAGGGATGCAGAACATTCACTCCATGACACAACAAATGATGGATTGAAGTTTGAGAGAATGAATGCAGAGTTATCTGCTGCTGTATCTCTTCCCAATGTGACTTCTGAGTTTTGA 1524 0.4626 MPDHSTGTMNDQLSRPTSIFGLRLWVVLGVCVGVAIVLLLFLISIWLASKRSKSKPSRRPLIPVDSKEIQEIRVDRAPSQDSKPNGTHIQSDPFPEQDPVPVIDRQALLPPSEDENPLGYNKIQFEIGKNHRISYPERAFARSSPHTSGEARPADQVPTVIPEVSHLGWGHWYTLRELEDSTNGFADENVIGEGGYGIVYHGILKDKTHVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNSKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVDYSRPPEEMNLVDWLKKMVSNRNAEGVLDPKLTEKPTSRALKRALLVALRCTDPNAQKRPKMGHIIHMLESEDSPCKEDRRVRRDAEHSLHDTTNDGLKFERMNAELSAAVSLPNVTSEF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0451 507 PANTHER OS01G0323000 PROTEIN 6 478 - -
Glsi09g0451 507 CDD STKc_IRAK 191 457 - -
Glsi09g0451 507 SUPERFAMILY Protein kinase-like (PK-like) 161 457 IPR011009 -
Glsi09g0451 507 SMART serkin_6 185 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0451 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Glsi09g0451 507 Gene3D Phosphorylase Kinase; domain 1 164 260 - -
Glsi09g0451 507 ProSiteProfiles Protein kinase domain profile. 185 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0451 507 ProSitePatterns Protein kinases ATP-binding region signature. 191 213 IPR017441 GO:0005524
Glsi09g0451 507 MobiDBLite consensus disorder prediction 73 100 - -
Glsi09g0451 507 Gene3D Transferase(Phosphotransferase) domain 1 261 474 - -
Glsi09g0451 507 FunFam Probable serine/threonine-protein kinase At1g01540 165 260 - -
Glsi09g0451 507 Pfam Protein kinase domain 186 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0451 507 FunFam Putative receptor-like serine/threonine-protein kinase 261 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0451 Glsi-ChrGlsi09 3105288 3109406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0451 162 490 Trihelix Transcription Factor Family AT1G70460 43.750 1.82e-89 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Glsi09g0451 Pkinase 1.5e-47 CL0016