Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi09g0446 | ATGACTATCGTTAACGAAGAAGGGCAAAAAACTCAAGCTTCCGGTGATAAAGAAGTAATTCAAAAGAGTCTTCTACAAAGCGATGCTCTTTATCAGTATATACTTGAAACCAATGTTTATCCAAGAGAGCACGAGTGCTTGAAGGAGCTTCGCGAGTTGACTGCAAAACACCCTCGGAACGTGATGGCGGTGTCTGCTGACGAAGGACAATTCCTGAACATGCTGCTTAAGCTCATGAACGCCAAGAACACCATGGAAATTGGTGTCTTCACTGGTTACTCTCTGCTCGCCTCTGCACTTGCTCTCCCGGATGATGGGAAGATATTGGCTATGGACATCAACCGGGCAGATTATGAACTGGGGTTGCCTATAATCGAAAAAGCTGGCGTTGCTCACAAGATTGACTTCAGAGAAGGACCTGCTCTTCCAGTTCTTGATCAAATGATCGAAGATGAAAAGCACAAGGGAGGGTTCGATTTCATTTTCGTAGACGCTGATAAGGATAACTACTTGAACTACCACAAGAGGGTGATTGAGCTGGTGAAGGTCGGGGGTTTGATTGGCTACGATAATACCCTCTGGTTCGGGTCTGTTGCTTCTGAAGCTGATCATTCCCCACAAAAATGGTACATCAGCTACTATCGTGATTATGTGCTGGAGCTCAACAAGGCCCTAGCCCTTGATCCCAGGATAGAGATTTGTCAACTTGCTGTTGGTGATGGGATTACCCTGTGCCGCCGCATCATCTAA | 750 | 0.4613 | MTIVNEEGQKTQASGDKEVIQKSLLQSDALYQYILETNVYPREHECLKELRELTAKHPRNVMAVSADEGQFLNMLLKLMNAKNTMEIGVFTGYSLLASALALPDDGKILAMDINRADYELGLPIIEKAGVAHKIDFREGPALPVLDQMIEDEKHKGGFDFIFVDADKDNYLNYHKRVIELVKVGGLIGYDNTLWFGSVASEADHSPQKWYISYYRDYVLELNKALALDPRIEICQLAVGDGITLCRRII | 249 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi09g0446 | 249 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 23 | 248 | IPR002935 | GO:0008171 | |
| Glsi09g0446 | 249 | FunFam | Caffeoyl-CoA O-methyltransferase 1 | 16 | 249 | - | - | |
| Glsi09g0446 | 249 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 27 | 247 | IPR029063 | - | |
| Glsi09g0446 | 249 | Gene3D | Vaccinia Virus protein VP39 | 13 | 249 | IPR029063 | - | |
| Glsi09g0446 | 249 | PANTHER | O-METHYLTRANSFERASE-RELATED | 21 | 248 | - | - | |
| Glsi09g0446 | 249 | CDD | AdoMet_MTases | 89 | 187 | - | - | |
| Glsi09g0446 | 249 | Pfam | O-methyltransferase | 37 | 248 | IPR002935 | GO:0008171 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi09g0446 | Glsi-ChrGlsi09 | 3069669 | 3070795 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi09g0446 | 6 | 248 | Monolignol Biosynthesis Gene Families | AT4G34050 | 75.309 | 2.71e-137 | 385 |