Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0427 ATGGAACCAGCAACTGCTCACTCATCATCTCAACCTACCTATTCAGCTTCTAGTACTGAACATCATCCCCCCAGTGTCTCTGGACAAAATGACAATGCGCGTGACTCAGCACCCTCGTTATCTGCTTCTGACAAATCATCCTGGGTGAGGAATCTGAAGTTTTCAAAGTCCCTTGGAGCAGAAGGAGAGGACTCGCAGGCTGGAGATATTGGGATGTCAACTTTCTCTCGCCTGACTAGTGGCCTTGGATTGCGAATGCTCTCAGTGCCTTCTGTACCAAATGAGACTGCTCCAGTCAATTCAGGAGCTGAGAAAACTAGTTTAATTGATTCATTCACCAAAGGGTTAGTTGATTCATCTAAGAGTGCAGTAAAGGCTATGCAGGTCAAGGCACGTCATATTGTCTCTCAAAACAAACGTAGATACCAGGATGAAGGATTTGATTTGGATATGGCATACATTACTGAAAATATAATCGCTATGGGATTTCCAGCTGGTGATCTTAGCTCTGGAATTTTCGGATATTTTGAGGGGTTCTATCGCAATCACATGGAAGAAGTGATCAAATTTTTCGAGACTCATCATGAGGGAAAGTACAAGGTATACAATCTTTGTTCAGAGAGGTTGTATGATGCATCGCTATTCCAGGGGAAGGCTGCAAGTTTTCCATTTGATGATCATAATTGCCCTCCTATTCAACTTATAGCATCATTTTGTCAAAGTGCATATTCCTGGTTGAAGCGGGATATTCAAAATGTGGTAGTTGTTCATTGTAAAGCTGGTATGGGGAGGACAGGACTGATGATTTGCTGCCTGCTTTTGTTTCTTAAGGCAAGTCTTGATATCAGCCTCAATAGACTATGGAGTCTTAATATTGGGTACATCTTTTTGTTTCTATGTTTTTCAATTTTTAAATTGTCAATAACTTCAACTATCATTTTGCAGTTCTTCCCAACTGCTGAGGAAGCCATTGATTGCTTTAACCAGAAAAGATGCATTGATGGGAAGGCTCTAGTTCTGCCGAGCCAGATTAGGTATGTCAAATACTTTGAACGGACTTTAACATACTTCAAGGGAGAAGTTCAGCCTGGACGAAGGTGCATGCTAAGAGGTTTTCGGCTTCACAAATGCCCTTATTGGATTAGGCCATCCATTACAATTTCTGATCATAATGGAATTCTTTTCACCACAAGAAAGCATCCAAAAACAAAGGATCTAATGCCTGAAGATTTTTGGATCAGTGCACCAAAGAAAGGAATTCTAGTCTTTGCATTACCAGGGGAGCCTGGTCTGACAGAGTTGGTTGGGGACTTCAAAATTTATTTTCATGATCGACAAGGAGATTTCTACTGTTGGTTGAATACAACAATGACAGAAAACCGAAAAATTTTAGATGCCTCGGATCTCGATGGTTTTGACAAGAGAAAAATCCCGGCTCCAGGATTCCAGGTCGAAGTAGTGATGGTAGACTATAACGGTACCGTACCTGCGAGGACAAAAGCCAATCCCGCCAACAAAGGATCTGTTCGGAGGACAGGCAATGTCCCAGCCTCAGATCCAAGGCTTGCATCTAATTCAAGTCAGAGTAAGGTCCCCAAAAATGGAGATGACGATGTATTCTCGGATAGTGAGGGAGAGGAAACCCAGGATTCAGAGAGCAGGAAAGCTAAAGCTGCATCTAAATCCAGATTTGTGGAACGTCATCAAGTATCTGATGCCCCTGCAGACCATATTGGGGTCTTAACACGGGGAACAAATCAGCTGTCACTCCAGCATGAGGAATATACACACAATATATCAACTACTGGTAAATTTCAGAAAACTCCTTCAGGGCCCAATACCCCTAAAATGGAGTTAGCCCGGGATAGTGATATCAGGGCCATAGCAGCCGATGCTTCAGTTTTTTCTTTTGGAGATGAAGATTTTGAAAGTGATTGA 1938 0.4236 MEPATAHSSSQPTYSASSTEHHPPSVSGQNDNARDSAPSLSASDKSSWVRNLKFSKSLGAEGEDSQAGDIGMSTFSRLTSGLGLRMLSVPSVPNETAPVNSGAEKTSLIDSFTKGLVDSSKSAVKAMQVKARHIVSQNKRRYQDEGFDLDMAYITENIIAMGFPAGDLSSGIFGYFEGFYRNHMEEVIKFFETHHEGKYKVYNLCSERLYDASLFQGKAASFPFDDHNCPPIQLIASFCQSAYSWLKRDIQNVVVVHCKAGMGRTGLMICCLLLFLKASLDISLNRLWSLNIGYIFLFLCFSIFKLSITSTIILQFFPTAEEAIDCFNQKRCIDGKALVLPSQIRYVKYFERTLTYFKGEVQPGRRCMLRGFRLHKCPYWIRPSITISDHNGILFTTRKHPKTKDLMPEDFWISAPKKGILVFALPGEPGLTELVGDFKIYFHDRQGDFYCWLNTTMTENRKILDASDLDGFDKRKIPAPGFQVEVVMVDYNGTVPARTKANPANKGSVRRTGNVPASDPRLASNSSQSKVPKNGDDDVFSDSEGEETQDSESRKAKAASKSRFVERHQVSDAPADHIGVLTRGTNQLSLQHEEYTHNISTTGKFQKTPSGPNTPKMELARDSDIRAIAADASVFSFGDEDFESD 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0427 645 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 125 284 - -
Glsi09g0427 645 SMART PTEN_C2_2 362 490 IPR014020 -
Glsi09g0427 645 ProSitePatterns Tyrosine specific protein phosphatases active site. 256 266 IPR016130 GO:0016311|GO:0016791
Glsi09g0427 645 Gene3D Protein tyrosine phosphatase superfamily 125 360 IPR029021 -
Glsi09g0427 645 CDD PTP_PTEN 150 352 IPR045101 GO:0016791
Glsi09g0427 645 MobiDBLite consensus disorder prediction 498 534 - -
Glsi09g0427 645 MobiDBLite consensus disorder prediction 547 569 - -
Glsi09g0427 645 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 254 282 IPR000387 GO:0016311|GO:0016791
Glsi09g0427 645 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 153 275 IPR029021 -
Glsi09g0427 645 MobiDBLite consensus disorder prediction 497 569 - -
Glsi09g0427 645 ProSiteProfiles Phosphatase tensin-type domain profile. 140 357 IPR029023 -
Glsi09g0427 645 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 117 595 - -
Glsi09g0427 645 MobiDBLite consensus disorder prediction 1 45 - -
Glsi09g0427 645 ProSiteProfiles C2 tensin-type domain profile. 364 491 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0427 Glsi-ChrGlsi09 2930031 2935662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0427 27 645 Protein tyrosine phosphatase (PTP) family AT3G19420 57.735 0.0 718