Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0426 ATGAGCTTGGGTATTCTTTCGAAGGCAGAGCGAATTAGCAGCATTCAAGCGCAGAATTGCTCCTTTCTGATTCCGCCCTCTATTTGGTCTTGCAACTTAGAAGAACCCGTCATGGACGAGAAAATAGACTGTACAGAGAAAAAGGTGCTGGTTGATATTGTAAAATTGTCACAAAAAAGAGGAATGAAGGGTACACTGGGAGACTGGAAAGATTTCTTAAACAGTTATGATAAAAAATTTGGGGCTAGTTTGAGTGATCCAGCAAAAAGGTCCCATGAGGTATTATCTGCATTTCTGAAGACATTTTCAAATGATGATGATTTGAAGTTTTTTGCTAACATCATGCAACGCCATTCAAATCAAGACATATTGGAGCAATTAAAAGACAAATCTCATGGATCCCCTGAGCAGAGGCTTGTCCAAATAACTCTGCAACACCCATTGTATCCACTGGACTATTCATTTACAGAACTTGATGAGGGTTGGTTGATTATAAACCTCAAGAAAAAAACCAAGGAGATGAGATCTACTGAGATGGTTGCTGTTGATTGTGAAATGGTTCTGTGTGAAGATGGGACTGATGCAGTAGTGAAAGTCTGTGTGGTTGACCGCAATTTAGAGGTCAAACTAAATGAACTTGTAAACCCCAGCAAAGCAATTGCAGACTACAGAACAGAGATTACTGGTGTTTCTTCTAGAGATCTAGAGGGTGTTACTTGCTCATTGGCTGATATACAGAAATCCATGAAGAAGCTGTTATCAAATGGAACAATATTAGTGGGGCACAGTTTACATAATGACCTACATGTGCTGAAGCTAGATCATGTTAGAGTGGTTGACACTTCATATATCTTCCAATGCTTGGATGGACCTATTCACAGGCGACCTTCTTTGAATAGTTTATGTAAGGCTGTGTTAGGTCATGAAGTTCGGAAAGAGGGTGCTCCACATAATTGTCTAGATGATGCATGTGCAGCAATGAAACTTGTTCTTGCTAAGATAGAACATGGCGTTGATAATGCAATTCCCTTGTTTCAAGAGCAAGTTCTTGAAAGTGAGATGGCAAAGCTTCTTCTACACAGGATACCAACCAGTGTTAATAGTGAAGTGTTACATAAAGTTGTTCCTGGAGACTTCACAATAGAACTGAAGTCTTCTAAGAAAGCTCGAGGAGAAAAATATTCCGCCTTGGCCATCTTTAAGAATCCACAAGAGGCACATGATGCCTATGAAAATGTCCAAGGCAGCCAAGAAGAGGATTCATATGGACGTCCGCAGAAGCTTGTCACATTTCAGCTCAGTTCAGGTATGACTTACAGTCTATACATTCGGAAAATGGCACCTGATGGCCCCCATGATCTCATTCCATCTAAGAGAGCGTTACAAGTGGACGAGACAGTTGTTGTTTCCAAGAAAGCAAAGATGGATCCGAAAATAGAAGATTATGACTTGACTGGGTCAAATAGGTGTGACCTTCACTTGAATGAGATCGAAGCATTAAATCAACGACTGAAACAAAATGATTTGGAGATTGAATCACTGAGGAAACAGTTGAAACAAAAAGATTACGAAATCAACATGTTGAATAAAATGGTATCCTCATTCAAAAAGGGATCAAAGAAAATGAAATAG 1632 0.3964 MSLGILSKAERISSIQAQNCSFLIPPSIWSCNLEEPVMDEKIDCTEKKVLVDIVKLSQKRGMKGTLGDWKDFLNSYDKKFGASLSDPAKRSHEVLSAFLKTFSNDDDLKFFANIMQRHSNQDILEQLKDKSHGSPEQRLVQITLQHPLYPLDYSFTELDEGWLIINLKKKTKEMRSTEMVAVDCEMVLCEDGTDAVVKVCVVDRNLEVKLNELVNPSKAIADYRTEITGVSSRDLEGVTCSLADIQKSMKKLLSNGTILVGHSLHNDLHVLKLDHVRVVDTSYIFQCLDGPIHRRPSLNSLCKAVLGHEVRKEGAPHNCLDDACAAMKLVLAKIEHGVDNAIPLFQEQVLESEMAKLLLHRIPTSVNSEVLHKVVPGDFTIELKSSKKARGEKYSALAIFKNPQEAHDAYENVQGSQEEDSYGRPQKLVTFQLSSGMTYSLYIRKMAPDGPHDLIPSKRALQVDETVVVSKKAKMDPKIEDYDLTGSNRCDLHLNEIEALNQRLKQNDLEIESLRKQLKQKDYEINMLNKMVSSFKKGSKKMK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0426 543 CDD REX1_like 180 331 IPR034922 -
Glsi09g0426 543 SUPERFAMILY Ribonuclease H-like 179 334 IPR012337 -
Glsi09g0426 543 Coils Coil 497 531 - -
Glsi09g0426 543 SMART exoiiiendus 178 339 IPR013520 -
Glsi09g0426 543 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 47 348 IPR047021 GO:0004527
Glsi09g0426 543 FunFam Small RNA degrading nuclease 3 174 348 - -
Glsi09g0426 543 Gene3D - 174 349 IPR036397 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0426 175 275 C2H2 Transcription Factor Family AT3G27970 33.621 2.65e-10 60.5