Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0421 ATGAGCTACCCGAGTGTTGCTCTCCATTTATGGTGGAGAATTTTTACACTTTCTCTTCTTGTTATTCCATGTTTTGGTCTAAACAGAGATGGAGTTCTGTTGCTTTCTTTCAAGCACTCTGTTCTGAGCGACCCTCTGTGCTTGCTTGAAAGCTGGAAGTACAGCGACCAGACGCCATGTTCATGGAATGGAGTTACATGTGCAACCATATCAGATGCAACAAATGCTCAGGATCGAGTAGTTGGCTTAGCTCTCCCAAATTCTCAGCTTCTGGGTTCTATTCCTGCTGATCTTGGTTTGATTGGGCACCTCCAAATTCTCGACCTTTCAAACAATTCTCTCAATGGGTCTCTTCCTTCTTCATTTTTCCAGGCTTCTGAGCTTCGGTCCCTTAATTTGTCTAATAATTTGATCTCCGGGGAGGTTCCGGATTCCATAGTACAGCTTAGAAATCTTCAGTTTCTTAATCTTTCTGACAATGCCTTGGCAGGAAATGTTCCCACCAATATGACCAATATGCAAAGCCTAACCTCTGCGTCTTTGAAGAATAATTACTTGTCTGGTGGTCTTCCTAGCGGGTTTCAAACGTTACAAGTTTTCGATGTATCTTCGAATTTGTTGAATGGATCTCTGCCTTCAGATTTTGGGGGTGCTACTTTGCAATATTTGAACATCTCCTATAACAGGTTTTCAGGGAAAATTCCTCCAGAGTTTGCAGAGGAAATTCCAAGTAACGCTACCGTTGACCTCTCCTTCAACAATCTCAACGGCGAAATTCCAGATTCCATCGTTTTCATGAATCAAGAATGGAAGTCATTTTATGGGAATCCTGATCTGTGCGGTGAACAAACCAAGAATCCCTGTCCTATTCCTTCTTCACCATCGTCTTCACCAAACGTCTCTGCTCCCACATCTCCTCCTGCATTCGCAGCAATTCCAAAGACACTTGACTCTCCCCCTGCCACCGCCAGTTCAGCAGGATCGCCAACTGGGTCTGCGCAGCAAAATAAGAATGGGCTTAGACGAGGAACAATAATAGGAATTGTAGTAGGAGATATTATAGGCATCGGAATATTAGCTTTGATTTTCTTGCATGTGTACAAGTTGAAGAGAAAGAGGAACGTGGAGAATGCACTGAAGAAGGAAGCTACTGCGGCAAAGAGTGATTGGTCATCATCATCCTCTCCGTCAAGGGGGTTCACAAGGTGGTCGTGCTTGCGCAAAAGAGCTGAAGAGGAGGATTTGTCAGGGTCCACAAGCTCTTCTGATAGTGAAGTAGAAGCTCATAATGGTCATGAAAATCAGGGGCAACAAGAACAATTCCAGAACAAAACAGGTACGCTGGTAACTGTTGATGGGGAAAAAGAGCTGGAGCTGGAAACACTCCTAAAGGCCTCAGCATACATACTGGGCGCCACTGGTTCCAGCATAATGTACAAGGCTGTGCTTGAAGATGGCAGAGCGCTGGCGGTTCGCAGAATTGGCGAGAGTGGTGTGGAACGGTTTAAGGAGTTTGAGAACCAAGTTCGGGTCATAGCAAAATTGGTGCATCCCAATCTGGTTCGCATTCGTGGCTTCTACTGGGGAAATGACGAGAAGCTCATAATCTATGAGTTCGTTCCAAATGCCAGCCTTGCCAACGTTCGATACAGGAAAGTGGGTTCTTCGCCTTGCCATTTACCGTGGGAAATCAGGCTCAAGATAGCAAGAGGGGTGGCACGTGGGCTGGCTTACCTCCACGACAAGAAGCACGTGCATGGAAATTTGAAGCCTAGCAACATTCTCTTGGGGAACGAGATGGAGCCTAAGATTGGAGACTTTGGGCTCGAGAGAATTGTAACGGGAGACACAAGTAATAAAGCAGGAGGATCGGCCCGAATTTTCGGGAGCAAGAGATCCACTGCTTCGCGTGATAGCTTCCAGGAGATCACTTTTGGGCCTAGCCCAAGCCCAAGCCCAAGCTCGATTGGGGGTGTTTCTCCTTACCATGCACCGGAGTCACTCAGAAACCTAAAGCCCCACCCAAAGTGGGATGTGTACTCGTTTGGGGTCATATTTCTCGAGCTACTGACGGGGAAGATCGTGGTTTTGGATGAGGTGGGTGAAGGAGGTGGGATATTGATTGAGGATAAGAACCGGGCGTTGAGAATGGCTGACGTGGCAATACGTGCTGACATGGAGGGTAAAGAAGAGGTGTTGTTGAGTTGCTTCAAGTTAGGGTATAGTTGCGCGTGCATGGTCCCACAGAAAAGGCCAGCAATGAAAGAAGTGCTACAAGTTCTTGATAAAATCCCAACCTCATCTTCATCCGCAAATTATTAA 2322 0.4647 MSYPSVALHLWWRIFTLSLLVIPCFGLNRDGVLLLSFKHSVLSDPLCLLESWKYSDQTPCSWNGVTCATISDATNAQDRVVGLALPNSQLLGSIPADLGLIGHLQILDLSNNSLNGSLPSSFFQASELRSLNLSNNLISGEVPDSIVQLRNLQFLNLSDNALAGNVPTNMTNMQSLTSASLKNNYLSGGLPSGFQTLQVFDVSSNLLNGSLPSDFGGATLQYLNISYNRFSGKIPPEFAEEIPSNATVDLSFNNLNGEIPDSIVFMNQEWKSFYGNPDLCGEQTKNPCPIPSSPSSSPNVSAPTSPPAFAAIPKTLDSPPATASSAGSPTGSAQQNKNGLRRGTIIGIVVGDIIGIGILALIFLHVYKLKRKRNVENALKKEATAAKSDWSSSSSPSRGFTRWSCLRKRAEEEDLSGSTSSSDSEVEAHNGHENQGQQEQFQNKTGTLVTVDGEKELELETLLKASAYILGATGSSIMYKAVLEDGRALAVRRIGESGVERFKEFENQVRVIAKLVHPNLVRIRGFYWGNDEKLIIYEFVPNASLANVRYRKVGSSPCHLPWEIRLKIARGVARGLAYLHDKKHVHGNLKPSNILLGNEMEPKIGDFGLERIVTGDTSNKAGGSARIFGSKRSTASRDSFQEITFGPSPSPSPSSIGGVSPYHAPESLRNLKPHPKWDVYSFGVIFLELLTGKIVVLDEVGEGGGILIEDKNRALRMADVAIRADMEGKEEVLLSCFKLGYSCACMVPQKRPAMKEVLQVLDKIPTSSSSANY 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0421 773 Gene3D Transferase(Phosphotransferase) domain 1 541 772 - -
Glsi09g0421 773 CDD STKc_IRAK 470 764 - -
Glsi09g0421 773 SUPERFAMILY Protein kinase-like (PK-like) 469 764 IPR011009 -
Glsi09g0421 773 Gene3D Ribonuclease Inhibitor 26 194 IPR032675 -
Glsi09g0421 773 Pfam Protein kinase domain 470 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0421 773 MobiDBLite consensus disorder prediction 318 337 - -
Glsi09g0421 773 MobiDBLite consensus disorder prediction 411 442 - -
Glsi09g0421 773 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Glsi09g0421 773 SUPERFAMILY L domain-like 27 281 - -
Glsi09g0421 773 Pfam Leucine Rich Repeat 220 238 IPR001611 GO:0005515
Glsi09g0421 773 FunFam Leucine-rich repeat receptor-like protein kinase 196 290 - -
Glsi09g0421 773 PRINTS Leucine-rich repeat signature 149 162 - -
Glsi09g0421 773 PRINTS Leucine-rich repeat signature 104 117 - -
Glsi09g0421 773 FunFam Os07g0541700 protein 540 630 - -
Glsi09g0421 773 Gene3D Phosphorylase Kinase; domain 1 422 539 - -
Glsi09g0421 773 PANTHER OS05G0588300 PROTEIN 196 766 - -
Glsi09g0421 773 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Glsi09g0421 773 MobiDBLite consensus disorder prediction 284 337 - -
Glsi09g0421 773 ProSiteProfiles Protein kinase domain profile. 464 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g0421 773 Gene3D Ribonuclease Inhibitor 195 290 IPR032675 -
Glsi09g0421 773 FunFam Leucine-rich repeat receptor-like protein kinase 27 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0421 Glsi-ChrGlsi09 2894720 2897423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0421 14 769 Receptor kinase-like Gene Family AT4G37250 58.831 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi09g0421 Pkinase 2.4e-32 CL0016