Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0411 ATGAGTACATTTTTAATAAAAATGAGAGGGAGTGGAGAATTGAATTTTCATGGGTCCAGATTTGTCGACATTTATGATCAGGAAGTGTCATTTGGGCTACAGTTGTTGGACTTCAGTATACATTCGCTGATGCCGTTGCACAGCGCTGTTGCCACCGCTCGTCTTGCTTCCCACATTTATGTTGAATCTCGCGCTTGCTGCGATTTTGAGCACATGCCGATGTTAAAACGTGGTTCGGCATTCTGCCCCACACCAGGAAAGCCTCTACAGAATGTTGTCTCCCTCTCTGTTTCCTTGAGGGAAAAAGAGGATGAGGTATCAATGAATAAACAAGACGTAAATGGTGGATCGAAGACAATTGGCACTGAAAAGGATAACTTAGGAGAATGGCTGAGTTTAGGACTCAACGGAGACATGCCTCTGGCAGCTGATGATCAAAACATAGATTCCCAATCAAAACCGCTCCAGAATAAGGTATTCTCATGCAACTTCTGCATGAGAAAGTTTTACAGTTCACAAGCGTTGGGTGGTCACCAGAATGCACACAAGAGGGAAAGAGGAGCAGCAAGAAGTTACCAAGCTCATAGGACGACGATGATGGCACCTACGGGGTTTCCTAGGTCACTGGGTGTGCAGCCCCACTCGCTTGTGCACAAGCACAAGCCAAGCAGAGAAGGGTCTGATATGGTTGCTCGATTTAGTGATGCCAATTATGGGTTTCAAATGGCATGGACGCCCTTTATACTTGAAAGACCCATGGATTTGATTTGGCCAGGAAGTTTTCGGGTGGATTTGCCAAAGCAAGAATCGGATGTAACTAAGAAGTTTTTCCCGTTGGAGTTTTCTTGTGAGAGATGGGGGTTGCCTTTTCCAATTGTTATTGTCCTAGTGTTCCGGCTGACAATATTGCAGAAGAAAACGGGTCTTGTCATAATGTCAATGGGTCTCATCTTCCCGAACTCGAGCTTGTACTGGGATCCATCTGGAGACACCCTTCTTCTCAGTTTGGATTGCCAAGTTGGGCTTGAGGCACACGATTGCTCAACTGCTTTATAA 1056 0.4555 MSTFLIKMRGSGELNFHGSRFVDIYDQEVSFGLQLLDFSIHSLMPLHSAVATARLASHIYVESRACCDFEHMPMLKRGSAFCPTPGKPLQNVVSLSVSLREKEDEVSMNKQDVNGGSKTIGTEKDNLGEWLSLGLNGDMPLAADDQNIDSQSKPLQNKVFSCNFCMRKFYSSQALGGHQNAHKRERGAARSYQAHRTTMMAPTGFPRSLGVQPHSLVHKHKPSREGSDMVARFSDANYGFQMAWTPFILERPMDLIWPGSFRVDLPKQESDVTKKFFPLEFSCERWGLPFPIVIVLVFRLTILQKKTGLVIMSMGLIFPNSSLYWDPSGDTLLLSLDCQVGLEAHDCSTAL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0411 351 SUPERFAMILY beta-beta-alpha zinc fingers 156 186 IPR036236 -
Glsi09g0411 351 PANTHER ZINC FINGER PROTEIN 4-LIKE 105 271 - -
Glsi09g0411 351 Gene3D Classic Zinc Finger 141 221 - -
Glsi09g0411 351 ProSitePatterns Zinc finger C2H2 type domain signature. 162 182 IPR013087 -
Glsi09g0411 351 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 187 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0411 Glsi-ChrGlsi09 2811393 2817174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0411 131 272 C2H2 Transcription Factor Family AT1G24625 38.000 1.56e-17 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0411 09 2811393 2817174 Glsi09g0411 09 2811393 2817174 ECH