Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0388 ATGGAAGCACGCGTTGCCGGGGCTGCAACCTGCATTCGTATGGGGCGGTTTATCACTCAAAATTCAAGGTTGAAACTTGTGATCCAAACGTCATTTTCAGCAATTCTTCCTTTGTATAATGAGCCGAAAGTCTTCACGCGCGTGCCACTATTTGTCGGTTTTGGAGCTATGACCATCCTGTATAGCTTCCAGATTCCCCGTCGAGCTTCACCTTTGGACGTCCTCAAGGCTCAAAAAGTGATCGCCGTTTGCCATGCTTTGAGTACGCCATCGCCATCAGTTCTGAGGCATAAGCCTGATAATAATTCTGTCTCAAACGCCCTCGCTGATCTCTCACCGCGAAAACAGCAGATGGCTCGTTTTATTTTTGTGCTTGTATGTTCCCTCTCATTAAGCCTGAGTCTTTATCCCTATTCTACTTCTGCTCAGCTAAGTCGACACCACTACGCCCAAATCTGCCCCAATGTTGAAAACATCGTTAGAGAAGCAGTTCGAAAGAAATTTCAACAAACATTTGTCACAGCTCCTGCAACCATTCGTCTCTTCTTTCACGATTGCTTTGTCCACGGCTGTGATGCTTCAATTTTGGTCGCATCCACAGGAAACAACAAAGCAGAGAAGGATCACCCAGACAATCTGTCATTGGCGGGAGATGGGTTTGACACAGTGATAAAAGCAAAAGCAGCAGTGGATGCTGTTCCACGGTGCAAGAACAAAGTCTCATGCGCTGATATTCTCGCCATGGCAACTCGGGATGTTATTGCACTGGCTGGTGGACCATCCTATGCGGTTGAATTGGGAAGATTCGATGGCCTAGTCTCAAAGGCTTCCCATGTAAACGGGAGGCTCCCACAACCAAGCTTTAACTTGAACCAGCTCAATTCCCTGTTCGCTTCAAATGGGCTAACCCAAACGCAAATGATTGCTCTCTCAGGTGCGCACACCCTCGGATTCTCGCATTGCAGCAGGTTCGCGAGCAGAATATACAACTTCAGCCGTCGAAAGGCAGTGGACCCCACATTGGACGAGCAATACGCAGCGGATCTAAAATCGATGTGCCCGAGGAATGTGGATCCGAGGATAGCCATCGATATGGACCCAAGCACTCCGAGGACATTCGACCATGTTTATTACAAGAATCTTCAACAGGGGAGGGGGCTGTTCACCTCGGACCAAGTCCTCTTTACGGATCCAAGGTCCAAGCCCACTGTAAATGCCTTTGCCGCCAATACCCACACCTTCCAAGCAAACTTCATAAATGCCATTACACAGTTAGGGCGAGTGGGAGTGAAAAATGCAAAGGATGGGAATATTCGTAGCGATTGTAGTGTGCTTAATTGA 1341 0.481 MEARVAGAATCIRMGRFITQNSRLKLVIQTSFSAILPLYNEPKVFTRVPLFVGFGAMTILYSFQIPRRASPLDVLKAQKVIAVCHALSTPSPSVLRHKPDNNSVSNALADLSPRKQQMARFIFVLVCSLSLSLSLYPYSTSAQLSRHHYAQICPNVENIVREAVRKKFQQTFVTAPATIRLFFHDCFVHGCDASILVASTGNNKAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPRCKNKVSCADILAMATRDVIALAGGPSYAVELGRFDGLVSKASHVNGRLPQPSFNLNQLNSLFASNGLTQTQMIALSGAHTLGFSHCSRFASRIYNFSRRKAVDPTLDEQYAADLKSMCPRNVDPRIAIDMDPSTPRTFDHVYYKNLQQGRGLFTSDQVLFTDPRSKPTVNAFAANTHTFQANFINAITQLGRVGVKNAKDGNIRSDCSVLN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0388 446 Pfam Peroxidase 160 410 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 FunFam Peroxidase 147 292 - -
Glsi09g0388 446 PANTHER - 126 446 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 PRINTS Plant peroxidase signature 218 231 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 PRINTS Plant peroxidase signature 305 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 PRINTS Plant peroxidase signature 239 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 PRINTS Plant peroxidase signature 153 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 PRINTS Plant peroxidase signature 177 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 PRINTS Plant peroxidase signature 420 433 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 PRINTS Plant peroxidase signature 380 397 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 PRINTS Plant peroxidase signature 364 379 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 Gene3D Peroxidase, domain 2 284 425 - -
Glsi09g0388 446 ProSiteProfiles Plant heme peroxidase family profile. 143 446 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 ProSitePatterns Peroxidases active site signature. 175 186 IPR019794 GO:0004601
Glsi09g0388 446 PRINTS Haem peroxidase superfamily signature 258 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 PRINTS Haem peroxidase superfamily signature 240 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 PRINTS Haem peroxidase superfamily signature 366 381 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 PRINTS Haem peroxidase superfamily signature 306 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 PRINTS Haem peroxidase superfamily signature 175 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi09g0388 446 Gene3D - 148 446 - -
Glsi09g0388 446 FunFam Peroxidase 284 425 - -
Glsi09g0388 446 CDD secretory_peroxidase 143 444 IPR033905 GO:0004601|GO:0042744
Glsi09g0388 446 SUPERFAMILY Heme-dependent peroxidases 143 446 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0388 Glsi-ChrGlsi09 2663595 2674365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0388 118 446 Peroxidase AT5G67400 65.653 5.78e-166 468