Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0386 ATGACGCAATTCACACCATCCCTACCACCGTTGCACCAAATCATTCCTTTTTCCAACCCTAGCACCAACAAAAATCAAATTCCTAGGACAAGGCCCTGGCCTGGATTCCCCACATCCAAGGCCCTAGCCAGCTTCGGCGATGCCAATTGCATGGAACAGTTACTTGTTCACTGTGCCAACGCCATCGAAAGCAATGATGTAACTCTGGCCCAACAAATCCTGTGGGTATTGAACAACATAGCACCCCAAGACGGAGACTCCAATCAGCGCTTAGCCTCTAGCTTCCTTCGAGCTCTCACCGCCCGCGCTGCCAAAACTGGAAGTTCCAAAATGCTAGCAGCAGTCGCAGATGCCCATACCAATCTTGCTATACACACCCACAAGTTCTCTGTCATCGAGCTTGCCAACTTCGTTGACTTGACACCCTGGCATCGCTTCGGTTTCACAGCAGCTAATGCAGCCATTCTAGAAGCTACTGAAGGCTTCTCAATCATCCACATCGTGGACTTAAGCTTGACACATTGCATGCAGATTCCTACGCTAATTGACGCCATTGCTACCCGCTATGACGTCCCTCCTCTGATCAAGCTCACAGTAGCTGGTGCTATCACAGATATCCCACCTATGCTTGACCTTTCCTACGACGAATTGGGTACAAAGTTAGTCAATTTCGCTAGGTCTAAGAACGTAATAATGGAATTTAGAGTGGTTTCTTCCAGTTACGCCGATGGGTTCGCGGCTTTGATCCAACATCTTCGGGTGCAACGTTTAGTTTACGCAGCAGAAGGATCGCGAACCGAAGCTTTGGTTATAAACTGTCACATGATGCTCCACTATATTCCTGAAGAAACCCTATCTGCAATTCCTGATGCAGATTCATCCCTGCGATCAATGTTTCTGAACGCCCTGCGGAGTTTAGACCCAACGTTTGTCGTTTTAGTAGATGAGGATGCAGATTTAACATCGAGTAATTTGGTTTGCAGACTAAGGAGTGCGTTCAATTATCTATGGATACCATACGACACAGTGGACACGTTCCTTCCACGAGGGAGTAAACAAAGGGAGTGGTATGAAGCAGATATTAGCTGGAAGATTGAGAATGTGGTAGCATATGAAGGGGTTCAGAGGGTTGAGAGGGTTGAGAGTAAGAGCAGGTGGGAGCAGCGAATGAGAAATGCAAACTTCCAGGGGATTACATTCAGTGAGGATGCGGTTTCGGAGGTGAAGGCCATGCTGGATGAACATGCAGCTGGATGGGGATTAAAGAAGGAAGATCAACATCTTTTGCTCACATGGAAAGGACACAATGTTGTTTTTGCCTCAGTTTGGTTGCCTGCCTAA 1341 0.4743 MTQFTPSLPPLHQIIPFSNPSTNKNQIPRTRPWPGFPTSKALASFGDANCMEQLLVHCANAIESNDVTLAQQILWVLNNIAPQDGDSNQRLASSFLRALTARAAKTGSSKMLAAVADAHTNLAIHTHKFSVIELANFVDLTPWHRFGFTAANAAILEATEGFSIIHIVDLSLTHCMQIPTLIDAIATRYDVPPLIKLTVAGAITDIPPMLDLSYDELGTKLVNFARSKNVIMEFRVVSSSYADGFAALIQHLRVQRLVYAAEGSRTEALVINCHMMLHYIPEETLSAIPDADSSLRSMFLNALRSLDPTFVVLVDEDADLTSSNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQREWYEADISWKIENVVAYEGVQRVERVESKSRWEQRMRNANFQGITFSEDAVSEVKAMLDEHAAGWGLKKEDQHLLLTWKGHNVVFASVWLPA 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0386 446 MobiDBLite consensus disorder prediction 1 29 - -
Glsi09g0386 446 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 50 433 IPR005202 -
Glsi09g0386 446 ProSiteProfiles GRAS family profile. 42 444 IPR005202 -
Glsi09g0386 446 MobiDBLite consensus disorder prediction 1 33 - -
Glsi09g0386 446 Pfam GRAS domain family 51 443 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0386 Glsi-ChrGlsi09 2644233 2645573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0386 36 445 GRAS Transcription Factor Family AT3G49950 61.928 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi09g0386 GRAS 3.2e-92 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0386 09 2644233 2645573 Glsi09g0386 09 2644233 2645573 ECH